| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3835 |
|---|
| Symbol | |
|---|
| ID | 9158015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3958076 |
|---|
| End bp | 3959224 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003648749 |
|---|
| Protein GI | 296141506 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAAT CCGACGCGGA CTACCGCGCG CGGATCCGGG AGTGGCTGGC GACGAATCTC
GCCGGCGAGT TCGCCGGGCT GCGGGGAGCC GGCGGCCCGG GCCGTGAACA CGAGTTCTTC
GACGAGCGGG TGGCGTGGGA GCGGCACCTG GCCGCGGCCG GGCTGAACTG CGTGGGGTGG
CCCGCACAGT ACGGCGGAGC CGGTGCGACG CTTGCGCAGC AGGTGATCTT CCACGAGGAG
TACGCCCGCG CAGAGGCGCC GGCCAAGGTC TCCCATCTCG GTCAGGAGCT CCTGGGGCCC
ACACTGATCG CGTTCGGTAG TACCGAACAG AAGCAGCGGT TCCTCCCGGC GATCCGCGAG
GTCCGGGAAC TCTGGTGCCA GGGATACTCC GAGCCGGGTG CCGGTTCCGA CCTCGCGAAC
GTCGGCACCA CCGCACGGCT CGAAGGCGAC GAGTGGGTGA TCTCGGGCCA GAAGGTGTGG
ACGTCGCTCG CACACGTCGC GGACTGGTGC TTCGTGGTGG CGCGGACGGA GCCGGGGAGC
GTCCGGCACA GGGGGCTTTC GTATCTGCTC GTCCCGATGG ACCAACCCGG CATCGAGGTC
CGTCCCATCG TCCAGCTCAC GGGTACGTCG GAGTTCAACG AGGTCTTCTT CGACGGTGCG
CGCACCGCCG CCGCCAACGT GGTGGGTGAC CCCGGAGACG GCTGGCGGGT CGCCATGGGC
ACGCTCGCCT TCGAACGCGG CGTGGCCACC CTCGGGCAGC AGCTCGGTTT CCGCCGCGAG
TTGCAGCATC TGACCGACCT CGCGATCGAC AGCGGCGCGG TCGATCGCCC GGAGATCGCC
GAATCGCTGC GCCGCGCGTG GACCGAACTC GATGTGATGC GCGCCCACGC GCTGCGCACC
CTGGGATCCG CCGAGACGGG CACCGCCGAG GTGGCGAAGC TGTTGTGGGC CAACTGGCAC
CGCCGGCTCG GTGAGATCGC CATGGCGGTG CGCGGAGCCG CCGGCCTGCT CGCCGATCCC
GAGTTCGATG ACTGGCAGCG CCTGTTCCTG TTCACCCGCG CCGACACCAT CTACGGCGGC
TCCAACGAGA TCCAGCGAAA CATCCTCGCC GAGCGCGTGC TCGGCCTGCC GAGAGAGGCC
CGACCGTGA
|
|---|
| Protein sequence | MGESDADYRA RIREWLATNL AGEFAGLRGA GGPGREHEFF DERVAWERHL AAAGLNCVGW
PAQYGGAGAT LAQQVIFHEE YARAEAPAKV SHLGQELLGP TLIAFGSTEQ KQRFLPAIRE
VRELWCQGYS EPGAGSDLAN VGTTARLEGD EWVISGQKVW TSLAHVADWC FVVARTEPGS
VRHRGLSYLL VPMDQPGIEV RPIVQLTGTS EFNEVFFDGA RTAAANVVGD PGDGWRVAMG
TLAFERGVAT LGQQLGFRRE LQHLTDLAID SGAVDRPEIA ESLRRAWTEL DVMRAHALRT
LGSAETGTAE VAKLLWANWH RRLGEIAMAV RGAAGLLADP EFDDWQRLFL FTRADTIYGG
SNEIQRNILA ERVLGLPREA RP
|
|---|
| |