Gene Spea_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2176 
Symbol 
ID5662569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp2633042 
End bp2634232 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content44% 
IMG OID641236779 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001502031 
Protein GI157961997 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCG ATTTTGATAA TGCAGATGAA TGCTTTCGTC GCGATGTGAG TCAATGGCTT 
AGTGATAATT TAAGCGGTGA ATTTGAATGT ATTCGTGGCC GAGGTGGTCC TGGCGACGAG 
CATATGTTTA TTGAAGAGCG TAAGGCTTGG GAGCGAAAAC TATATCAAGG TGGCTGGACA 
TGCATTGGCT GGCCAAAAGA GTACGGAGGA AAGGCGGCCA GCATAGTGCA GCAAGTTATT 
TTTAACGAAG AATACGCAAG GGCTGGAGGC CCAGGCAGAA TAGGCCATAT AGGTGAAACT 
CTAATTGGGC CAACATTAAT AGCCTATGGC AGTGAGCAAC AAAAACGCCG TTATCTTGCG 
GGTATTTTAA CCGGCACCGA ATTTTGGTGT CAGGGGTACT CTGAACCCAA TGCTGGTTCT 
GACTTAGCTA ACGTACATAC CAAAGCTAAG TTTGATGATG AAACGGGCCA ATGGTTAATA 
AGCGGCCAGA AGGTGTGGAC ATCGTTAGCC CACGAATCCC ATTATTGTTT CGTTGTCGCT 
AGAACCGATC CAAAGTCTGT TGGCCAAAAA GGCTTGGGTT TCTTTTTAGT TAACATGGAG 
CAGCCTGAGG TCGATGTTAG ACCCATAGCT CAAATGACAT CAACCAGTGA ATTCAATGAA 
GTTTTTTTTG ATGATGCAGT ATGTAGCAGC GATGATTTGG TTGGTCAATG TGGCGATGGT 
TGGACAATTG CGATGAGTCT ACTTGGATTT GAGCGTGGAA TTTCAACTCT GGGTCAACAG 
ATGCTTTTCA CTAACGAGTT CAACGATATA GTTAATGCAG CAAGAGCCAA TGGGTCCGCT 
GATGATCCGA TAATAAGGCA AAGAATTAGT GATGCGTATA TTGGCTTAAA AATAATGCGC 
TATAACAGTA TGCGTATGCT GTCAGATTCC AATGTTGACG GCGATTTATC TAAAGAGGCT 
ATGTGCTATA AGCTTTACTG GGCGAGCTGG CACCGTAACT TAGGTAAACT TGCTATGGAT 
GTACTTGGAC CGGAGGCTGA AATTTTACTC GACAGCCCCT ATCAACTGAC TCAGCTACAA 
TCTATGTACC TTTTTTCTCG TTCAGATACC ATCTATGGTG GGACCAATCA AATCCAGCGC 
AATATTATTG CCGAGCGTGC TCTTGGAATG CCAAAAGAAC CTAGAGGTTA A
 
Protein sequence
MKLDFDNADE CFRRDVSQWL SDNLSGEFEC IRGRGGPGDE HMFIEERKAW ERKLYQGGWT 
CIGWPKEYGG KAASIVQQVI FNEEYARAGG PGRIGHIGET LIGPTLIAYG SEQQKRRYLA 
GILTGTEFWC QGYSEPNAGS DLANVHTKAK FDDETGQWLI SGQKVWTSLA HESHYCFVVA 
RTDPKSVGQK GLGFFLVNME QPEVDVRPIA QMTSTSEFNE VFFDDAVCSS DDLVGQCGDG 
WTIAMSLLGF ERGISTLGQQ MLFTNEFNDI VNAARANGSA DDPIIRQRIS DAYIGLKIMR 
YNSMRMLSDS NVDGDLSKEA MCYKLYWASW HRNLGKLAMD VLGPEAEILL DSPYQLTQLQ 
SMYLFSRSDT IYGGTNQIQR NIIAERALGM PKEPRG