| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0939 |
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| Symbol | |
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| ID | 3902909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1104601 |
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| End bp | 1105779 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637878273 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_480052 |
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| Protein GI | 86739652 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0130462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.579337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGA CCCACCCGCC GGCCGAGGAA CGGTTCCGTG CCGAGTTGCG GGCCTGGCTC
GCCGAGAACA TCCCCGCAGC CTGGACGGAG CCCGGGTTCT GGGCCGGCGT GGGGGAGGCC
GAGGGCTTCG ACCTGCGGCG GGACTGGGAG CGGCGCAAGG CGCTCGCGGG CTTCGCCGGG
ATCGACTGGC CGGTGGAGTA CGGCGGCCGG GGCGGTACCC CGGGGATGAG GGCCATCTAC
GACCAGGAGA CGCAGCTCGC CCGGGCGCCG CGCTCGGTCA ACACGCTGGG CCTGGCCTTC
CTCGCGCCGA CGGTGATGGC GGTCGGGACG CCCGAGCAGA AGCGCGACAT CCTCGGGCCG
ATGCTGCGCA ACGAGGTGAT CTGGTGCCAG GGCTTCTCGG AACCCGGCGC GGGCTCCGAC
CTCGCGGCGC TGCGTACGTC CGGGGTACTC GACGGGGACG AGTACGTGGT CAACGGGCAG
AAGGTCTGGA CGACGTTCGC GAACCGCGGA GACAAGATCT TCACCCTGGT CCGGACCGAG
CCCGGCAGCC GGCGCCATCA CGGCATCTCG CTGCTGCTCA TCGACATGCA CGCTCCCGGG
GTGGAGGTCC GGCCGATCCG GCAGATGAGC GGCGTCAGCG AGTTCGGCGA GGTCTTCCTC
ACCGACGTGC GGGTGGCGGC GTCGGAGTGC CTGGGCGGGA TCGGCAACGG CTGGGCGACG
GCGATGCTTC TGCTGTCGTT CGAGCGCGGC GCGTCCGGGA TCAGCCAGTA CACCGGATTC
CGGCGCAGCT ACGACGAGAT CGTCCGGGTC GCCCGGGCGC TCGGGCGCGA CACCGACCCG
GTGCTGCGCC AGGAGCTGGG CCGGCGCATG GTCGAGCTCG AATGCCTGCG CTACCACTCG
ATGCACGTCC TCACCCAGGT AGAGCAGGGC CGTGACCTGG GGGCCGAGTC GTCGATCACC
AAACTGCAGT GGTCGGAGAC GTACCAGGAC CTGTTCGAGA CCTTTGATGC GCTGCTCGGC
GCCGATGTGG CGCTCACCCA CCCCACCGCG GACCTCGATC TGACGACGCT GCGGCAGGAG
AGCTTCTGGA CCCGCTCCGT CACCATCTGG GGTGGATCCT CGCAGGTACA GCGCACGATC
GTCGCGGAGC GGGTCCTCGG CCTGCCACGC GGATCATGA
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| Protein sequence | MDLTHPPAEE RFRAELRAWL AENIPAAWTE PGFWAGVGEA EGFDLRRDWE RRKALAGFAG
IDWPVEYGGR GGTPGMRAIY DQETQLARAP RSVNTLGLAF LAPTVMAVGT PEQKRDILGP
MLRNEVIWCQ GFSEPGAGSD LAALRTSGVL DGDEYVVNGQ KVWTTFANRG DKIFTLVRTE
PGSRRHHGIS LLLIDMHAPG VEVRPIRQMS GVSEFGEVFL TDVRVAASEC LGGIGNGWAT
AMLLLSFERG ASGISQYTGF RRSYDEIVRV ARALGRDTDP VLRQELGRRM VELECLRYHS
MHVLTQVEQG RDLGAESSIT KLQWSETYQD LFETFDALLG ADVALTHPTA DLDLTTLRQE
SFWTRSVTIW GGSSQVQRTI VAERVLGLPR GS
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