Gene TBFG_11963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_11963 
Symbol 
ID5222640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2193214 
End bp2194443 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content70% 
IMG OID640606720 
Productacyl-CoA dehydrogenase fadE17 
Protein accessionYP_001287900 
Protein GI148823146 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones291 
Plasmid unclonability p-value0.0444584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones205 
Fosmid unclonability p-value0.860383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTCA GCTACCCACC CGAAGCGGAA GCGTTCCGCG ACCGGATCCG GGAGTTTGTG 
GCCGAGCACC TGCCGCCCGG GTGGCCCGGA CCCGGGGCGC TGCCGCCCCA CGAGCGGGAA
GAGTTCGCCC GGCACTGGCG GCGGGCCCTG GCCGGCGCTG GCCTGGTCGC GGTGTCCTGG
CCGACGGAAT ACGGGGGTGG TGGCCTGTCC CCGATGGAAC AAGTGGTGCT CGCCGAGGAA
TTCGCCCGCG CCGGCGCGCC CGAACGCGCG GAAAACGACC TGCTCGGAAT CGACCTGCTG
GGCAACACCC TGATCGCCCT GGGTTCCGAG GCGCAGAAGC GGCATTTCCT GCCGCGCATC
CTCAGCGGCG AGCATCGGTG GTGCCAGGGC TTCTCCGAGC CGGAGGCCGG CTCCGACCTG
GCCTCGGTGC GCACCAGGGG GGTGCTCGAC GGTGACGAAT GGGTGATCAA CGGCCACAAA
ATCTGGACGT CGGCCGGCAC CACCGCAAAC TGGATCTTCC TGCTGGCGCG GACCGATCCC
AGCGCTGCGA AACACCGGGG CCTGTCGTTT CTGCTGGTGC CCATGGACCA GCCCGGCGTC
GTGGTCCGGC CGATCGTCAA CGCGGCCGGG CACTCCTCGT TCAGCGAGGT CTTCCTGACC
GATGCCCGCA CCAGCGCCGG CAATGTCGTC GGCCGGGTCG GCGACGGCTG GTCGACCGCC
ATGACGCTGC TCGGCTTCGA ACGCGGATCG CACATCGCCA CCGCCGCCAT CGATTTTGAG
CGGGACCTGC AGCGGCTGTG CGAGCTGGCC CGTGACCGCG GATTACACAC CGATCCACGG
GTACGAGACG GCTTGGCGTG GTGCTATGCC CGGGTTCAGA TCATGCGGTA TCGGGGCTAC
CGTGACCTCA CCCTGGCCCT GACCGGACGG CCGCCCGGCG CGGAAGCCGC GATCACGAAG
GTCATCTGGA GCGAATATTT CCGCCGGTAC ACCGATCTCG CCGTCGAAAT CCTGGGGCTC
GAGGCGCTGG GCCCGCGGGG GCCCGGCAAC GGCGGTGCGC GGCTGGTCCC GGAGGCGGGT
ACGCCAAACT CCCCGGCCTG CTGGATGGAT GAGCTGCTCT ACGCACGGGC CGCGACGATC
TATGCCGGCA GCTCGCAGAT CCAGCGCAAC GTGATCGGCG AGCGGCTGCT CGGCCTCCCC
AAGGAGCCGC GGCCCGAAGT GCTCTGCTGA
 
Protein sequence
MDVSYPPEAE AFRDRIREFV AEHLPPGWPG PGALPPHERE EFARHWRRAL AGAGLVAVSW 
PTEYGGGGLS PMEQVVLAEE FARAGAPERA ENDLLGIDLL GNTLIALGSE AQKRHFLPRI
LSGEHRWCQG FSEPEAGSDL ASVRTRGVLD GDEWVINGHK IWTSAGTTAN WIFLLARTDP
SAAKHRGLSF LLVPMDQPGV VVRPIVNAAG HSSFSEVFLT DARTSAGNVV GRVGDGWSTA
MTLLGFERGS HIATAAIDFE RDLQRLCELA RDRGLHTDPR VRDGLAWCYA RVQIMRYRGY
RDLTLALTGR PPGAEAAITK VIWSEYFRRY TDLAVEILGL EALGPRGPGN GGARLVPEAG
TPNSPACWMD ELLYARAATI YAGSSQIQRN VIGERLLGLP KEPRPEVLC