More than 300 homologs were found in PanDaTox collection
for query gene Swit_1604 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
432 aa  895    Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  62.23 
 
 
414 aa  557  1e-157  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  61.69 
 
 
415 aa  553  1e-156  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  62.47 
 
 
415 aa  551  1e-156  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  62.8 
 
 
413 aa  550  1e-155  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  60.96 
 
 
415 aa  550  1e-155  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  60.72 
 
 
415 aa  546  1e-154  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  61.02 
 
 
414 aa  543  1e-153  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  60.96 
 
 
414 aa  542  1e-153  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  61.26 
 
 
415 aa  539  9.999999999999999e-153  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_010338  Caul_3426  acyl-CoA dehydrogenase domain-containing protein  49.39 
 
 
407 aa  424  1e-117  Caulobacter sp. K31  Bacteria  normal  0.751929  normal  0.216447 
 
 
-
 
NC_009719  Plav_0965  acyl-CoA dehydrogenase domain-containing protein  49.39 
 
 
409 aa  413  1e-114  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1032  acyl-CoA dehydrogenase domain-containing protein  48.56 
 
 
411 aa  379  1e-104  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.605452  normal 
 
 
-
 
NC_009511  Swit_3397  acyl-CoA dehydrogenase domain-containing protein  47.43 
 
 
403 aa  353  2.9999999999999997e-96  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00717177  decreased coverage  0.00584794 
 
 
-
 
NC_013739  Cwoe_0736  acyl-CoA dehydrogenase domain protein  41.22 
 
 
403 aa  302  1e-80  Conexibacter woesei DSM 14684  Bacteria  normal  0.453117  normal 
 
 
-
 
NC_008048  Sala_1636  acyl-CoA dehydrogenase-like protein  40.88 
 
 
401 aa  299  6e-80  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.552524 
 
 
-
 
NC_008048  Sala_1632  acyl-CoA dehydrogenase-like protein  41.79 
 
 
407 aa  291  1e-77  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0101171  normal 
 
 
-
 
NC_008048  Sala_1246  acyl-CoA dehydrogenase-like protein  41.76 
 
 
384 aa  284  3.0000000000000004e-75  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.235066  normal 
 
 
-
 
NC_013595  Sros_7781  acyl-CoA dehydrogenase domain-containing protein  44.35 
 
 
395 aa  283  3.0000000000000004e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  39.75 
 
 
378 aa  275  1.0000000000000001e-72  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_009338  Mflv_0344  acyl-CoA dehydrogenase domain-containing protein  44.32 
 
 
394 aa  273  3e-72  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2698  acyl-CoA dehydrogenase domain-containing protein  42.7 
 
 
390 aa  273  3e-72  Thermobispora bispora DSM 43833  Bacteria  normal  0.96365  normal  0.79248 
 
 
-
 
NC_009077  Mjls_5569  acyl-CoA dehydrogenase domain-containing protein  43.89 
 
 
396 aa  273  5.000000000000001e-72  Mycobacterium sp. JLS  Bacteria  normal  0.313382  normal 
 
 
-
 
NC_008146  Mmcs_5188  acyl-CoA dehydrogenase-like protein  43.61 
 
 
396 aa  271  1e-71  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5277  acyl-CoA dehydrogenase domain-containing protein  43.61 
 
 
396 aa  271  1e-71  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0394  acyl-CoA dehydrogenase domain-containing protein  44.23 
 
 
398 aa  271  2e-71  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.254856  normal  0.326104 
 
 
-
 
NC_008699  Noca_0803  acyl-CoA dehydrogenase domain-containing protein  40.66 
 
 
378 aa  271  2e-71  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0320  acyl-CoA dehydrogenase domain protein  38.58 
 
 
370 aa  268  1e-70  Sulfolobus solfataricus 98/2  Archaea  normal  0.25734  n/a   
 
 
-
 
NC_013595  Sros_6825  dehydrogenase family protein  38.31 
 
 
393 aa  267  2.9999999999999995e-70  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178037 
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  39.39 
 
 
380 aa  263  4.999999999999999e-69  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_013510  Tcur_1475  acyl-CoA dehydrogenase domain protein  44.48 
 
 
397 aa  261  1e-68  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0513972  n/a   
 
 
-
 
NC_009921  Franean1_5572  acyl-CoA dehydrogenase domain-containing protein  45.35 
 
 
398 aa  261  2e-68  Frankia sp. EAN1pec  Bacteria  normal  0.98735  normal 
 
 
-
 
NC_014158  Tpau_1861  acyl-CoA dehydrogenase domain protein  41.69 
 
 
395 aa  259  4e-68  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1155  acyl-CoA dehydrogenase domain protein  45.74 
 
 
396 aa  258  1e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2909  acyl-CoA dehydrogenase domain-containing protein  43.75 
 
 
396 aa  258  2e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.25619  normal  0.0238889 
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  39.25 
 
 
383 aa  258  2e-67  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2814  acyl-CoA dehydrogenase domain-containing protein  40.76 
 
 
386 aa  251  2e-65  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  38.67 
 
 
390 aa  251  2e-65  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  39.8 
 
 
393 aa  248  1e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2309  putative acyl-CoA dehydrogenase  40.38 
 
 
411 aa  248  2e-64  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16750  acyl-CoA dehydrogenase  39.06 
 
 
403 aa  248  2e-64  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.73205  normal 
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  38.54 
 
 
381 aa  245  9e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  40.56 
 
 
386 aa  244  1.9999999999999999e-63  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_013131  Caci_1367  acyl-CoA dehydrogenase domain protein  39.02 
 
 
400 aa  244  1.9999999999999999e-63  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  36.73 
 
 
396 aa  243  3.9999999999999997e-63  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_008726  Mvan_2600  acyl-CoA dehydrogenase domain-containing protein  35.36 
 
 
424 aa  240  2.9999999999999997e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3835  acyl-CoA dehydrogenase domain protein  38.23 
 
 
382 aa  238  1e-61  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8743  acyl-CoA dehydrogenase domain protein  37.41 
 
 
404 aa  237  2e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.316323 
 
 
-
 
CP001800  Ssol_2123  acyl-CoA dehydrogenase domain protein  37.08 
 
 
363 aa  237  3e-61  Sulfolobus solfataricus 98/2  Archaea  unclonable  0.000012052  n/a   
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  33.08 
 
 
385 aa  236  4e-61  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_009077  Mjls_2336  acyl-CoA dehydrogenase domain-containing protein  35.63 
 
 
422 aa  235  1.0000000000000001e-60  Mycobacterium sp. JLS  Bacteria  normal  0.751134  hitchhiker  0.00284944 
 
 
-
 
NC_009921  Franean1_2922  acyl-CoA dehydrogenase domain-containing protein  36.3 
 
 
416 aa  234  2.0000000000000002e-60  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4134  acyl-CoA dehydrogenase domain-containing protein  37.04 
 
 
413 aa  234  3e-60  Nocardioides sp. JS614  Bacteria  normal  0.355452  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  35.71 
 
 
397 aa  233  5e-60  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_009338  Mflv_3794  acyl-CoA dehydrogenase domain-containing protein  34.37 
 
 
427 aa  233  5e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.297142  normal 
 
 
-
 
NC_008146  Mmcs_2297  acyl-CoA dehydrogenase-like protein  35.38 
 
 
422 aa  231  1e-59  Mycobacterium sp. MCS  Bacteria  decreased coverage  0.0092497  n/a   
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  35.52 
 
 
402 aa  232  1e-59  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  36.1 
 
 
399 aa  232  1e-59  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_008705  Mkms_2344  acyl-CoA dehydrogenase domain-containing protein  35.38 
 
 
422 aa  231  1e-59  Mycobacterium sp. KMS  Bacteria  normal  0.529004  normal  0.371665 
 
 
-
 
NC_007777  Francci3_0939  acyl-CoA dehydrogenase-like  36.34 
 
 
392 aa  231  2e-59  Frankia sp. CcI3  Bacteria  normal  0.0130462  normal  0.579337 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  33.99 
 
 
398 aa  229  6e-59  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  35.7 
 
 
398 aa  229  1e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  35.94 
 
 
398 aa  228  2e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  33.5 
 
 
398 aa  228  2e-58  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_009921  Franean1_1625  acyl-CoA dehydrogenase domain-containing protein  33.97 
 
 
422 aa  228  2e-58  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  36.2 
 
 
383 aa  227  3e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  35.05 
 
 
397 aa  226  6e-58  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_009719  Plav_1805  acyl-CoA dehydrogenase domain-containing protein  35.14 
 
 
397 aa  226  8e-58  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.337752  normal 
 
 
-
 
NC_007347  Reut_A1563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  37.04 
 
 
388 aa  225  1e-57  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2719  acyl-CoA dehydrogenase domain-containing protein  35.58 
 
 
429 aa  225  1e-57  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  35.45 
 
 
398 aa  224  2e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  35.21 
 
 
398 aa  224  3e-57  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  34.72 
 
 
398 aa  223  4e-57  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3589  acyl-CoA dehydrogenase domain-containing protein  34.83 
 
 
404 aa  223  4e-57  Frankia sp. EAN1pec  Bacteria  normal  normal  0.646816 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  35.61 
 
 
399 aa  223  4.9999999999999996e-57  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  33.9 
 
 
398 aa  223  6e-57  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  34.72 
 
 
398 aa  223  6e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4727  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
423 aa  223  6e-57  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  34.72 
 
 
398 aa  223  6e-57  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  34.72 
 
 
398 aa  223  6e-57  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  33.89 
 
 
398 aa  223  6e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  34.72 
 
 
398 aa  223  6e-57  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  34.72 
 
 
398 aa  223  6e-57  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  33.74 
 
 
398 aa  223  8e-57  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  33.17 
 
 
398 aa  222  9e-57  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4581  acyl-CoA dehydrogenase domain-containing protein  36.5 
 
 
394 aa  222  9.999999999999999e-57  Frankia sp. EAN1pec  Bacteria  normal  normal  0.676846 
 
 
-
 
NC_009921  Franean1_5603  acyl-CoA dehydrogenase domain-containing protein  34.84 
 
 
462 aa  222  9.999999999999999e-57  Frankia sp. EAN1pec  Bacteria  normal  0.447806  hitchhiker  0.00691492 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  33.74 
 
 
398 aa  222  9.999999999999999e-57  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  33.82 
 
 
416 aa  222  9.999999999999999e-57  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  35.61 
 
 
400 aa  222  9.999999999999999e-57  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  33.58 
 
 
402 aa  222  9.999999999999999e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_013159  Svir_17890  acyl-CoA dehydrogenase  33.91 
 
 
402 aa  221  1.9999999999999999e-56  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0953451  normal  0.548212 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  34.23 
 
 
398 aa  220  3e-56  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_009077  Mjls_4137  acyl-CoA dehydrogenase domain-containing protein  38.98 
 
 
381 aa  221  3e-56  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  33.5 
 
 
398 aa  221  3e-56  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  33.5 
 
 
398 aa  221  3e-56  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  34.24 
 
 
396 aa  219  5e-56  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  34.14 
 
 
398 aa  219  5e-56  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  34.83 
 
 
393 aa  219  7e-56  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  33.82 
 
 
398 aa  219  7.999999999999999e-56  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
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