More than 300 homologs were found in PanDaTox collection
for query gene Bxe_C0605 on replicon NC_007953
Organism: Burkholderia xenovorans LB400



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007953  Bxe_C0605  putative acyl-CoA dehydrogenase  100 
 
 
382 aa  778    Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00592793  normal  0.0752366 
 
 
-
 
NC_010338  Caul_1895  acyl-CoA dehydrogenase domain-containing protein  63.54 
 
 
383 aa  467  9.999999999999999e-131  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3557  Acyl-CoA dehydrogenase, central region  59.69 
 
 
386 aa  453  1.0000000000000001e-126  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0924  acyl-CoA dehydrogenase domain-containing protein  59.27 
 
 
383 aa  452  1.0000000000000001e-126  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0207  putative acyl-CoA dehydrogenase  59.84 
 
 
387 aa  445  1.0000000000000001e-124  Burkholderia xenovorans LB400  Bacteria  normal  0.698342  normal  0.648676 
 
 
-
 
NC_007974  Rmet_5144  putative acyl-CoA dehydrogenase  59.1 
 
 
385 aa  447  1.0000000000000001e-124  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.16071 
 
 
-
 
NC_009511  Swit_3274  acyl-CoA dehydrogenase domain-containing protein  61.5 
 
 
399 aa  447  1.0000000000000001e-124  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.220833 
 
 
-
 
NC_009427  Saro_3624  acyl-CoA dehydrogenase domain-containing protein  59.14 
 
 
381 aa  432  1e-120  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4074  acyl-CoA dehydrogenase-like protein  59.1 
 
 
386 aa  434  1e-120  Cupriavidus metallidurans CH34  Bacteria  normal  0.0382192  normal 
 
 
-
 
NC_010002  Daci_0088  acyl-CoA dehydrogenase domain-containing protein  57.78 
 
 
385 aa  426  1e-118  Delftia acidovorans SPH-1  Bacteria  normal  0.745656  normal 
 
 
-
 
NC_007509  Bcep18194_C7127  Acyl-CoA dehydrogenase  56.88 
 
 
385 aa  424  1e-117  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0061  acyl-CoA dehydrogenase domain-containing protein  57.07 
 
 
385 aa  424  1e-117  Acidovorax sp. JS42  Bacteria  normal  0.957206  normal 
 
 
-
 
NC_007974  Rmet_5357  putative acyl-CoA dehydrogenase  60.11 
 
 
383 aa  423  1e-117  Cupriavidus metallidurans CH34  Bacteria  normal  0.0369214  normal 
 
 
-
 
NC_008786  Veis_4040  acyl-CoA dehydrogenase domain-containing protein  56.88 
 
 
410 aa  421  1e-116  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.572322  normal 
 
 
-
 
NC_007348  Reut_B4563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  54.52 
 
 
387 aa  404  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  0.131003  n/a   
 
 
-
 
NC_007952  Bxe_B2737  putative acyl-CoA dehydrogenase  55.41 
 
 
385 aa  402  1e-111  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3810  acyl-CoA dehydrogenase domain protein  57.3 
 
 
386 aa  399  9.999999999999999e-111  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.492901  n/a   
 
 
-
 
NC_008048  Sala_1240  acyl-CoA dehydrogenase-like protein  56.99 
 
 
640 aa  394  1e-108  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.485103  normal 
 
 
-
 
NC_011992  Dtpsy_0079  acyl-CoA dehydrogenase domain protein  53.56 
 
 
380 aa  386  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6298  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  53.41 
 
 
379 aa  387  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3260  acyl-CoA dehydrogenase domain-containing protein  52.6 
 
 
383 aa  376  1e-103  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0907  acyl-CoA dehydrogenase domain protein  51.63 
 
 
374 aa  362  5.0000000000000005e-99  Gordonia bronchialis DSM 43247  Bacteria  normal  0.731697  n/a   
 
 
-
 
NC_009485  BBta_7535  putative acyl-CoA dehydrogenase  46.89 
 
 
385 aa  338  9.999999999999999e-92  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0482  acyl-CoA dehydrogenase domain protein  46.75 
 
 
386 aa  337  1.9999999999999998e-91  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708423  n/a   
 
 
-
 
NC_007958  RPD_0271  acyl-CoA dehydrogenase-like  46.51 
 
 
386 aa  333  3e-90  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.360882 
 
 
-
 
NC_007778  RPB_0558  Acyl-CoA dehydrogenase-like  46.51 
 
 
386 aa  331  1e-89  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.58726  normal  0.0406105 
 
 
-
 
NC_008726  Mvan_3917  acyl-CoA dehydrogenase domain-containing protein  49.05 
 
 
381 aa  329  5.0000000000000004e-89  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0198331  normal 
 
 
-
 
NC_009338  Mflv_5166  Fis family transcriptional regulator  49.08 
 
 
382 aa  328  7e-89  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.170532 
 
 
-
 
NC_013757  Gobs_3772  acyl-CoA dehydrogenase domain protein  47.96 
 
 
378 aa  328  1.0000000000000001e-88  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.717662  n/a   
 
 
-
 
NC_008254  Meso_3278  acyl-CoA dehydrogenase-like  45.8 
 
 
383 aa  326  3e-88  Chelativorans sp. BNC1  Bacteria  normal  0.827107  n/a   
 
 
-
 
NC_008726  Mvan_2876  acyl-CoA dehydrogenase domain-containing protein  46.9 
 
 
383 aa  320  1.9999999999999998e-86  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0157602  normal 
 
 
-
 
NC_009077  Mjls_4154  acyl-CoA dehydrogenase domain-containing protein  49.2 
 
 
384 aa  311  1e-83  Mycobacterium sp. JLS  Bacteria  normal  0.041099  normal  0.843392 
 
 
-
 
NC_008146  Mmcs_0213  acyl-CoA dehydrogenase-like protein  47.72 
 
 
385 aa  310  2.9999999999999997e-83  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0203  acyl-CoA dehydrogenase domain-containing protein  47.99 
 
 
385 aa  310  2.9999999999999997e-83  Mycobacterium sp. JLS  Bacteria  normal  normal  0.672211 
 
 
-
 
NC_008705  Mkms_0223  acyl-CoA dehydrogenase domain-containing protein  47.72 
 
 
408 aa  309  5.9999999999999995e-83  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2499  acyl-CoA dehydrogenase domain protein  45.73 
 
 
371 aa  306  3e-82  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000304997  n/a   
 
 
-
 
NC_009921  Franean1_6850  acyl-CoA dehydrogenase domain-containing protein  35.83 
 
 
378 aa  201  9.999999999999999e-51  Frankia sp. EAN1pec  Bacteria  normal  0.290885  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  34.52 
 
 
396 aa  199  1.0000000000000001e-49  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  35.29 
 
 
386 aa  197  3e-49  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  33.76 
 
 
396 aa  197  3e-49  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  34.1 
 
 
400 aa  196  5.000000000000001e-49  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  36.34 
 
 
398 aa  195  1e-48  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  34.26 
 
 
396 aa  194  2e-48  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  35.53 
 
 
398 aa  192  6e-48  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  34.66 
 
 
398 aa  192  1e-47  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  40.23 
 
 
386 aa  191  2e-47  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  36.08 
 
 
398 aa  191  2e-47  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  36.08 
 
 
398 aa  191  2e-47  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  33.08 
 
 
399 aa  190  4e-47  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
398 aa  189  5e-47  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1792  acyl-CoA dehydrogenase domain-containing protein  34.5 
 
 
399 aa  189  5.999999999999999e-47  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.719209 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  35.8 
 
 
398 aa  189  8e-47  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  35.8 
 
 
398 aa  189  9e-47  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_008726  Mvan_4958  acyl-CoA dehydrogenase domain-containing protein  36.28 
 
 
392 aa  188  1e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.439071 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  33.67 
 
 
452 aa  188  1e-46  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  35.41 
 
 
398 aa  188  2e-46  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  34.09 
 
 
396 aa  187  2e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  34.26 
 
 
398 aa  187  2e-46  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  32.07 
 
 
414 aa  187  3e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  34.26 
 
 
398 aa  186  4e-46  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  34.26 
 
 
398 aa  186  4e-46  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  34.26 
 
 
398 aa  186  4e-46  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  34.7 
 
 
393 aa  187  4e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  34.26 
 
 
398 aa  186  4e-46  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  34.26 
 
 
398 aa  186  4e-46  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_007973  Rmet_0845  acyl-CoA dehydrogenase-like protein  34.02 
 
 
398 aa  186  5e-46  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.444844 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  35.13 
 
 
398 aa  186  5e-46  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  33.07 
 
 
415 aa  186  6e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  34.49 
 
 
386 aa  186  7e-46  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  32.14 
 
 
414 aa  184  3e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_007348  Reut_B3603  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  33.5 
 
 
411 aa  183  4.0000000000000006e-45  Ralstonia eutropha JMP134  Bacteria  normal  0.0376418  n/a   
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  31.81 
 
 
403 aa  183  4.0000000000000006e-45  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  32.18 
 
 
383 aa  183  4.0000000000000006e-45  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  31.81 
 
 
403 aa  182  7e-45  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  33.92 
 
 
396 aa  182  8.000000000000001e-45  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  33.14 
 
 
415 aa  182  1e-44  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_009953  Sare_2814  acyl-CoA dehydrogenase domain-containing protein  34.11 
 
 
386 aa  182  1e-44  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_013510  Tcur_2177  acyl-CoA dehydrogenase domain protein  32.63 
 
 
732 aa  181  2e-44  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00000163847  n/a   
 
 
-
 
NC_007794  Saro_1568  acyl-CoA dehydrogenase-like  33.25 
 
 
395 aa  180  2.9999999999999997e-44  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.164987  n/a   
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  33.33 
 
 
415 aa  180  4e-44  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_009077  Mjls_4783  acyl-CoA dehydrogenase domain-containing protein  33.82 
 
 
385 aa  179  4.999999999999999e-44  Mycobacterium sp. JLS  Bacteria  normal  0.7953  normal  0.758289 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  31.82 
 
 
402 aa  179  7e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  31.7 
 
 
416 aa  179  7e-44  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  31.47 
 
 
385 aa  179  7e-44  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_008705  Mkms_4489  acyl-CoA dehydrogenase domain-containing protein  33.82 
 
 
385 aa  179  1e-43  Mycobacterium sp. KMS  Bacteria  normal  0.253194  normal 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  34.42 
 
 
399 aa  179  1e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4402  acyl-CoA dehydrogenase-like protein  33.82 
 
 
385 aa  179  1e-43  Mycobacterium sp. MCS  Bacteria  normal  0.324199  n/a   
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  34.68 
 
 
393 aa  177  2e-43  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  34.47 
 
 
398 aa  178  2e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_013510  Tcur_3643  acyl-CoA dehydrogenase domain protein  34.1 
 
 
390 aa  177  3e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  0.100578  n/a   
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  32.82 
 
 
415 aa  177  3e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_009921  Franean1_4582  acyl-CoA dehydrogenase domain-containing protein  33.51 
 
 
418 aa  177  3e-43  Frankia sp. EAN1pec  Bacteria  normal  0.770197  normal  0.671641 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  32.68 
 
 
393 aa  177  3e-43  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  33.08 
 
 
393 aa  177  4e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007950  Bpro_5277  acyl-CoA dehydrogenase-like  34.13 
 
 
389 aa  176  6e-43  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3762  acyl-CoA dehydrogenase domain-containing protein  34.6 
 
 
392 aa  176  6e-43  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.315428  n/a   
 
 
-
 
NC_007908  Rfer_1646  acyl-CoA dehydrogenase-like  33.24 
 
 
393 aa  176  7e-43  Rhodoferax ferrireducens T118  Bacteria  normal  0.765479  n/a   
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  33.16 
 
 
398 aa  176  7e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  33.68 
 
 
432 aa  176  9e-43  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1850  acyl-CoA dehydrogenase domain-containing protein  35 
 
 
396 aa  175  9.999999999999999e-43  Sphingomonas wittichii RW1  Bacteria  normal  0.441994  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>