| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1240 |
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| Symbol | |
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| ID | 4080311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1289343 |
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| End bp | 1291265 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009600 |
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| Product | acyl-CoA dehydrogenase-like protein |
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| Protein accession | YP_616288 |
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| Protein GI | 103486727 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.485103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGATC GCCTGATAGG CCGCGCTCAG TTCCAAAATA TCGCTCATCC GGCTGTGCTG
CGCCTCGCGC AGCAATCGCT TCGTCAGCCG CAGCGCGCGC GGCGGGTTGC AGACGATCCG
CTCGGCAATG GCGATCGCGC GATCGAGCAG CTCCGCATCG GGCACCACAT CGGTAACCAG
ACCATATTCC TTTGCCTGAG CCGCGTCAAA GCGGTCGCCG GTCAGGAACA GCTCGGCCGC
GCGCGGATAG CCGAGCACCT TTTGCAGCAA CCACGCTCCG CCGTCGCCGG GAACGATACC
GACCTTGATG AAGCTGCACG CGAACTTCGC GCTTTCCGCT GCAATGCGAA TGTCGCAGGT
GCAGGCGAGG TCGCAGCCAA GGCCGATCGC ATGGCCGTTG ATCGCGGCGA TCATCGGCAC
TTCGCAATCC ATCAGCGCGC GGATCACCGC CTGTACGCCT TTGCGATAAT TGGCTCGCGT
CGAATCGGGC TGATCGAGCA CGCCGATTCC GGTGCGCTCC TGCATTCCTT TGAGGTTTCC
GCCGGCGCTG AACGCCTTGC CGCTGCCGGT CAGGATCATC GCGCTGATGC CGCGATCGTC
GCCGAGGGTG CGGAGCGTGT CGATGATGTC CTGGCAATCG TCATGCGTGC CGATCGCATT
CATGCTTTCG GGCTTGATCA TCGTCAGGAT CGCGATCTTG CCCCGCCGCT CGACACTCAA
AAACTCGCCC ATCGCCAATT ATCCTTTGCT GCTCCGGGGA AGCTATTGCA TGGCTGGCGC
GACATGCAAG GCTTTGCGCT CTATCCCTTC GACCCACCCG GCGATGTCGC GGCACTGCGC
GCCGAATTGC GGGCATGGCT TGCGGCGAAC CAGCCCAGGG GCGACGTCGT TGCGCGCGCC
AATTGCTGGG CGAGTTTCGA CACGGATTTC AGCCGCAAGC TGGGCGCGGC GGGTTATGTC
GGGATGACTC TGCCACCACG CTTTGGTGGC GGCGGCCGCC ATCCGCTCGA ACGCTATGTG
GTGATCGAAG AACTGCTTGC GGCGGGTGCT CCGGTCGGCG CACACTGGAT CGCCGACCGC
CAGACCGGGC CGCTGATCCT CCGCTACGGC AGCGAGGAAC AATGTCAGCG CTATCTGCCC
GGGATTGCCA GGGGCGAACT ATATGCCTGC ATCGGACTAT CCGAACCCGG CGCCGGGTCG
GATCTCGCCG CGGTGCGAAC CACGGCGCGC GAGACTGCCG AGGGCTGGCG GATCAACGGC
CAGAAAATCT GGACCACCGG CGCGCATTTC TCGCACATCA TGCTGGCGCT GGTGCGCACC
GAAGCGGGGA GCGAGCGTAA CGCGGGACTG AGCCAGCTGC TGATCGACCT CGACACTCCC
GGCATTACCA TCCGCCCGAT CATCGACATG GCGGACCACC ATGATTTCAA CGAAGTCTTC
TTTGACGATG TGCTCGTGCC GCACGGCGCG TTGGTTGGCG AGCGGGGGCA GGGGTGGAGG
CAGGTCACCG CCGAACTCGG TCTCGAACGA TCGGGGCCGG AGCGTTATCT GTCGAGCCAC
GCGCTGCTCG CCGCGCTGAT CGATGCGGCG GGGGTGGACC CCGACCCGGC GGTGATCGCG
CTGATCGGCG AACTCGTCGC CGAAATGTGG ACGCTGCGCC AGCTTTCGAT GTCGACCGCG
GCCAAGCTCG CGGCGGGCGA GGATCCGATG GTCGAAGCGT CGGTGGTCAA GGAACTGGGC
AATGCCTTCG AACAGGATAT GCCGCGCCGG GTGCAGGCGA TCGTCGAGTG CCCGTGGGAC
GATCCGAGCG ACCTTGGCCG GTTGCTGCGC GCCTTGCTGA TCGCATCGCC CAGTTTCTCG
CTGCGCGGCG GCACGCGCGA GGTGATCCGC GGGATCATCG CGCGCGGGCT GGGCCTCAGA
TGA
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| Protein sequence | MDDRLIGRAQ FQNIAHPAVL RLAQQSLRQP QRARRVADDP LGNGDRAIEQ LRIGHHIGNQ
TIFLCLSRVK AVAGQEQLGR ARIAEHLLQQ PRSAVAGNDT DLDEAARELR AFRCNANVAG
AGEVAAKADR MAVDRGDHRH FAIHQRADHR LYAFAIIGSR RIGLIEHADS GALLHSFEVS
AGAERLAAAG QDHRADAAIV AEGAERVDDV LAIVMRADRI HAFGLDHRQD RDLAPPLDTQ
KLAHRQLSFA APGKLLHGWR DMQGFALYPF DPPGDVAALR AELRAWLAAN QPRGDVVARA
NCWASFDTDF SRKLGAAGYV GMTLPPRFGG GGRHPLERYV VIEELLAAGA PVGAHWIADR
QTGPLILRYG SEEQCQRYLP GIARGELYAC IGLSEPGAGS DLAAVRTTAR ETAEGWRING
QKIWTTGAHF SHIMLALVRT EAGSERNAGL SQLLIDLDTP GITIRPIIDM ADHHDFNEVF
FDDVLVPHGA LVGERGQGWR QVTAELGLER SGPERYLSSH ALLAALIDAA GVDPDPAVIA
LIGELVAEMW TLRQLSMSTA AKLAAGEDPM VEASVVKELG NAFEQDMPRR VQAIVECPWD
DPSDLGRLLR ALLIASPSFS LRGGTREVIR GIIARGLGLR
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