| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0376 |
|---|
| Symbol | |
|---|
| ID | 5198163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 399270 |
|---|
| End bp | 400469 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640579916 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001260885 |
|---|
| Protein GI | 148553303 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.337989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGC TGCACGATCC GGAACTGGAA GGTTTTCGCA AGGAGATCCG GGCCTTCATC
GACGAGGTGC TTCCGCCCGA GATGAAGGCG CGGCAGCGCA CCAAGGTCCA GAACAACGCG
ACCATCCAGG ACCAGCAGGA CTGGATGCGC ATCCTCAATC GCCACGGCCG CGCGGTGGCG
CACTGGCCGA AGGAGCATGG CGGGTGCGAC TGGACCCCGC AGCAGCTCTT CATCTTCAAC
GAGGAGCTCT ACGCCGCCGA CGCGCCCGAG TTCGACTGGG GCGGCACCCA TATGCTGGGG
CCGGTGCTCT ACACCTTCGG GTCACAGGTG CTGCGCGAAC GCTTCCTGCC GATGATCCGC
AACGGCGACA CCTATTGGGC GCAGGGCTTC TCCGAGCCGG GCTCGGGCTC CGACCTCGCC
TCGCTGCGCA CCTCGGCCGA GCTGGTCGGC GACACATATG TCGTCAACGG CCAGAAGATC
TGGACGAGCG GCGCCGCCCA TGCGCGCTGG GGCTTCTTCC TGGTGCGGAC CGACAAGACG
GTGAAGCCGC AAAAGGGCAT CTCCTTCCTG ATCATCGACA TGGCGAGCCC CGGCGTCACC
GTCCGGCAGA TTCCGCAGAT CAACGGCGAG GCGCATCTGT GCGAGGTGTT CCTCGACAAT
GTCGAGGTGC CGGCCGAGCA GCTCGTCGGC GAGCCCGGCA TGGGCTGGAC CTACGCCAAA
TTCCTGCTCG AGCATGAGCG CACCACCTCG AGCTTCATCT ATTGGAGCAA GCGCGAGCTG
GAGCGCGCCA AGGAGATCGC CCGCCACGAG ACGGCCGGCG GCCGGCGCGT GTGCGACGAT
CCCGCCTATC GCGCGCGCTT CGCCCGGGTG CAGGCCGACC TGATCGCGCT CGAATGGTCG
GTGCTGCGCG TGCTGGCGCA TGAGGAGACC GGCTTTCCCG AGGCGGCCGC CGCCTCGGTG
CTCAAGATCC GCGGGTCCGA GCTGCAGCAG GAGATCACCA TGCTCCAGCT CGACGCGCTC
GGCGCCAAGT CGCTGCGCTA TTACGAGCCC GGCCCGGACG CGCCCGCGCC GAGCGCCGAC
TGGGCCGAGC ATGTTCCCGG CCGCACCACC ATCGCCCTGA TCACCCGCGC CGCCACCATC
TATGGCGGCA CCAAGCAGGT GCAGAAGAAC ATCCTCGCCA AGCTGGCCTA CGGACTCTGA
|
|---|
| Protein sequence | MELLHDPELE GFRKEIRAFI DEVLPPEMKA RQRTKVQNNA TIQDQQDWMR ILNRHGRAVA
HWPKEHGGCD WTPQQLFIFN EELYAADAPE FDWGGTHMLG PVLYTFGSQV LRERFLPMIR
NGDTYWAQGF SEPGSGSDLA SLRTSAELVG DTYVVNGQKI WTSGAAHARW GFFLVRTDKT
VKPQKGISFL IIDMASPGVT VRQIPQINGE AHLCEVFLDN VEVPAEQLVG EPGMGWTYAK
FLLEHERTTS SFIYWSKREL ERAKEIARHE TAGGRRVCDD PAYRARFARV QADLIALEWS
VLRVLAHEET GFPEAAAASV LKIRGSELQQ EITMLQLDAL GAKSLRYYEP GPDAPAPSAD
WAEHVPGRTT IALITRAATI YGGTKQVQKN ILAKLAYGL
|
|---|
| |