More than 300 homologs were found in PanDaTox collection
for query gene Gbro_3955 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_3955  acyl-CoA dehydrogenase domain protein  100 
 
 
400 aa  820    Gordonia bronchialis DSM 43247  Bacteria  normal  0.888919  n/a   
 
 
-
 
NC_009565  TBFG_13538  acyl-CoA dehydrogenase fadE26  73.88 
 
 
400 aa  600  1e-170  Mycobacterium tuberculosis F11  Bacteria  normal  0.0408741  hitchhiker  0.000000336026 
 
 
-
 
NC_008726  Mvan_5206  acyl-CoA dehydrogenase domain-containing protein  73 
 
 
393 aa  575  1.0000000000000001e-163  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.164971 
 
 
-
 
NC_009338  Mflv_1551  acyl-CoA dehydrogenase domain-containing protein  72.75 
 
 
393 aa  571  1.0000000000000001e-162  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.815219 
 
 
-
 
NC_009077  Mjls_5005  acyl-CoA dehydrogenase domain-containing protein  71.75 
 
 
392 aa  570  1e-161  Mycobacterium sp. JLS  Bacteria  normal  0.512394  normal  0.425 
 
 
-
 
NC_008705  Mkms_4710  acyl-CoA dehydrogenase domain-containing protein  71.22 
 
 
395 aa  565  1e-160  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4622  acyl-CoA dehydrogenase-like protein  71.22 
 
 
395 aa  565  1e-160  Mycobacterium sp. MCS  Bacteria  normal  0.580586  n/a   
 
 
-
 
NC_009953  Sare_2808  acyl-CoA dehydrogenase domain-containing protein  66.25 
 
 
401 aa  541  1e-153  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000244181 
 
 
-
 
NC_014158  Tpau_3806  acyl-CoA dehydrogenase domain protein  66.25 
 
 
394 aa  529  1e-149  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.989567  n/a   
 
 
-
 
NC_009380  Strop_2609  acyl-CoA dehydrogenase domain-containing protein  64.65 
 
 
401 aa  526  1e-148  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2517  acyl-CoA dehydrogenase domain-containing protein  62 
 
 
395 aa  520  1e-146  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2176  acyl-CoA dehydrogenase domain protein  56.47 
 
 
396 aa  449  1e-125  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.22711  normal 
 
 
-
 
NC_013510  Tcur_3483  acyl-CoA dehydrogenase domain protein  49.62 
 
 
387 aa  387  1e-106  Thermomonospora curvata DSM 43183  Bacteria  normal  0.650377  n/a   
 
 
-
 
NC_013510  Tcur_3643  acyl-CoA dehydrogenase domain protein  49.88 
 
 
390 aa  374  1e-102  Thermomonospora curvata DSM 43183  Bacteria  normal  0.100578  n/a   
 
 
-
 
NC_009901  Spea_2142  acyl-CoA dehydrogenase domain-containing protein  49.25 
 
 
389 aa  367  1e-100  Shewanella pealeana ATCC 700345  Bacteria  normal  0.120399  n/a   
 
 
-
 
NC_013131  Caci_0058  acyl-CoA dehydrogenase domain protein  47.77 
 
 
402 aa  362  5.0000000000000005e-99  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3317  acyl-CoA dehydrogenase domain-containing protein  46.88 
 
 
390 aa  357  9.999999999999999e-98  Sphingomonas wittichii RW1  Bacteria  normal  0.757034  hitchhiker  0.0000492573 
 
 
-
 
NC_013595  Sros_8197  acyl-CoA dehydrogenase protein  46.91 
 
 
384 aa  342  9e-93  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1510  acyl-CoA dehydrogenase domain-containing protein  46.17 
 
 
387 aa  328  8e-89  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5256  acyl-CoA dehydrogenase domain-containing protein  46.02 
 
 
387 aa  327  3e-88  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.34656 
 
 
-
 
NC_008699  Noca_2790  acyl-CoA dehydrogenase domain-containing protein  45.75 
 
 
743 aa  324  1e-87  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2678  acyl-CoA dehydrogenase domain-containing protein  46.42 
 
 
380 aa  323  4e-87  Salinispora tropica CNB-440  Bacteria  normal  0.26456  normal  0.0878146 
 
 
-
 
NC_013441  Gbro_0884  acyl-CoA dehydrogenase domain protein  45.52 
 
 
387 aa  321  9.999999999999999e-87  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2886  acyl-CoA dehydrogenase domain-containing protein  45.19 
 
 
380 aa  321  1.9999999999999998e-86  Salinispora arenicola CNS-205  Bacteria  normal  0.54081  normal 
 
 
-
 
NC_014158  Tpau_3855  acyl-CoA dehydrogenase domain protein  48 
 
 
751 aa  319  6e-86  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13576  acyl-CoA dehydrogenase fadE29  45.19 
 
 
387 aa  317  2e-85  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000543797 
 
 
-
 
NC_009077  Mjls_5060  acyl-CoA dehydrogenase domain-containing protein  45.27 
 
 
387 aa  310  2e-83  Mycobacterium sp. JLS  Bacteria  normal  0.714933  normal  0.840022 
 
 
-
 
NC_008705  Mkms_4761  acyl-CoA dehydrogenase domain-containing protein  45.02 
 
 
387 aa  307  2.0000000000000002e-82  Mycobacterium sp. KMS  Bacteria  normal  0.950594  normal 
 
 
-
 
NC_008146  Mmcs_4675  acyl-CoA dehydrogenase-like protein  45.02 
 
 
387 aa  307  2.0000000000000002e-82  Mycobacterium sp. MCS  Bacteria  normal  0.448802  n/a   
 
 
-
 
NC_009511  Swit_1850  acyl-CoA dehydrogenase domain-containing protein  34.29 
 
 
396 aa  231  2e-59  Sphingomonas wittichii RW1  Bacteria  normal  0.441994  normal 
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  34.47 
 
 
403 aa  228  1e-58  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  34.4 
 
 
396 aa  225  1e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  34.87 
 
 
396 aa  223  6e-57  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_007517  Gmet_2199  Acyl-CoA dehydrogenase-like  34.6 
 
 
388 aa  221  1.9999999999999999e-56  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000000079384  hitchhiker  0.00524222 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  33.9 
 
 
396 aa  218  1e-55  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  36.17 
 
 
399 aa  218  1e-55  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  33.08 
 
 
386 aa  216  4e-55  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  33.01 
 
 
397 aa  215  9e-55  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5498  acyl-CoA dehydrogenase domain-containing protein  37.13 
 
 
399 aa  214  1.9999999999999998e-54  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_5207  acyl-CoA dehydrogenase domain-containing protein  37.13 
 
 
399 aa  214  1.9999999999999998e-54  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2287  acyl-CoA dehydrogenase domain-containing protein  34.8 
 
 
385 aa  214  1.9999999999999998e-54  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5118  acyl-CoA dehydrogenase-like protein  37.13 
 
 
399 aa  214  1.9999999999999998e-54  Mycobacterium sp. MCS  Bacteria  normal  0.840312  n/a   
 
 
-
 
NC_008726  Mvan_4379  acyl-CoA dehydrogenase domain-containing protein  35.7 
 
 
385 aa  213  2.9999999999999995e-54  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.627573  normal 
 
 
-
 
NC_007333  Tfu_1468  Acyl-CoA dehydrogenase  37.96 
 
 
716 aa  213  3.9999999999999995e-54  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  33.66 
 
 
396 aa  213  3.9999999999999995e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  33.99 
 
 
397 aa  213  4.9999999999999996e-54  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  33.5 
 
 
398 aa  212  1e-53  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_013441  Gbro_0690  acyl-CoA dehydrogenase domain protein  32.27 
 
 
398 aa  211  2e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  33.74 
 
 
398 aa  211  2e-53  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  34.55 
 
 
385 aa  211  2e-53  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  32.43 
 
 
396 aa  210  3e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  33.82 
 
 
400 aa  209  6e-53  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  33.33 
 
 
402 aa  209  7e-53  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  34.54 
 
 
402 aa  208  1e-52  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  32.21 
 
 
398 aa  205  1e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  32.45 
 
 
398 aa  205  1e-51  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  33.9 
 
 
452 aa  204  2e-51  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  33.41 
 
 
402 aa  204  2e-51  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  32.52 
 
 
398 aa  204  3e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_013757  Gobs_2179  acyl-CoA dehydrogenase domain protein  33.42 
 
 
391 aa  204  3e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  32.93 
 
 
402 aa  204  3e-51  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  32.93 
 
 
402 aa  204  3e-51  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3726  acyl-CoA dehydrogenase domain-containing protein  34.08 
 
 
383 aa  204  3e-51  Nocardioides sp. JS614  Bacteria  normal  0.018504  n/a   
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  31.97 
 
 
398 aa  203  5e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  32.94 
 
 
398 aa  203  6e-51  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5356  acyl-CoA dehydrogenase domain protein  30.92 
 
 
400 aa  202  6e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  normal  0.999676 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  33.17 
 
 
398 aa  202  7e-51  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  32.61 
 
 
398 aa  202  7e-51  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  32.69 
 
 
402 aa  202  7e-51  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  32.61 
 
 
398 aa  202  7e-51  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  32.94 
 
 
398 aa  202  8e-51  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  32.77 
 
 
398 aa  202  8e-51  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  32.94 
 
 
398 aa  202  8e-51  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  33.09 
 
 
398 aa  202  8e-51  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_009077  Mjls_1724  acyl-CoA dehydrogenase domain-containing protein  33.17 
 
 
410 aa  202  8e-51  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  32.94 
 
 
398 aa  202  8e-51  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  32.94 
 
 
398 aa  202  8e-51  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  32.94 
 
 
398 aa  202  8e-51  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  32.28 
 
 
398 aa  202  8e-51  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  31.8 
 
 
393 aa  202  9e-51  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  32.35 
 
 
398 aa  201  9.999999999999999e-51  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  32.43 
 
 
400 aa  202  9.999999999999999e-51  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  32.37 
 
 
398 aa  201  1.9999999999999998e-50  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  32.52 
 
 
398 aa  200  3e-50  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
398 aa  201  3e-50  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_008146  Mmcs_1743  acyl-CoA dehydrogenase-like protein  32.93 
 
 
410 aa  200  3e-50  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1790  acyl-CoA dehydrogenase domain-containing protein  32.93 
 
 
410 aa  200  3e-50  Mycobacterium sp. KMS  Bacteria  normal  0.340582  normal 
 
 
-
 
NC_007347  Reut_A1563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  33.74 
 
 
388 aa  200  3.9999999999999996e-50  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  32.13 
 
 
398 aa  199  7e-50  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  34.16 
 
 
386 aa  199  7e-50  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  33.82 
 
 
393 aa  199  7e-50  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  33.5 
 
 
402 aa  199  7.999999999999999e-50  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  32.84 
 
 
393 aa  199  7.999999999999999e-50  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  32.45 
 
 
403 aa  199  7.999999999999999e-50  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  32.45 
 
 
403 aa  199  9e-50  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  32.84 
 
 
393 aa  199  1.0000000000000001e-49  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  32.76 
 
 
393 aa  198  2.0000000000000003e-49  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_008726  Mvan_1965  acyl-CoA dehydrogenase domain-containing protein  33.65 
 
 
410 aa  198  2.0000000000000003e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.180628  normal 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  32.45 
 
 
416 aa  197  3e-49  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  32.69 
 
 
401 aa  197  3e-49  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
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