Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3855 |
Symbol | |
ID | 9158035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3978645 |
End bp | 3980900 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003648769 |
Protein GI | 296141526 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACTTCC ACCCGGACGA GAACCAGGCG GCCGTCGCCG GCCTGGCGGC GGACGTGCTC ACGCGTTCCA CGGAGCAGGG CGACTGGCGC GCCACCTGGA CCGACCTCGC GCGCGCCGAC CTGCTGGGCC TGCACGCACC CGAATCCGTC GGAGGCGCCG GTCTCGGCGC CGAAGAGATG ACGGCAGTGC TCACCGAGGC GGGCCGACTG CACTGCACAG CACCACTGCT CCCGGCCCTA GCGCTCGGCA TCGCACCGGT CGCCGCGCAC GGCACCACGG AGCAACAGCA GCGACTGCTG CCCGCGGCCC TGAGCGGCGA ACAGCTCATC GTGGGCGCCC TCAACGAGGC GGGGGCCGCC CTGCCCCGCC ACCCCCGCAC CCGGGCCGAG CGCACCGCCG ACGGCTGGTC GCTCACCGGA CGCAAGGTGG CGGTGGGGTA CGCGCAGCAC GCCGCACACC TGCTGGTGAG CGCGAGTACC GATGCCGGCG CCGCGATCTT CGTCGTGGAC TCCGGGGCTC CCGGTCTCAC CGTGCTGCCC AGCCCGTCGT CATCCGCGGC GCCGGAGGCC ACCGTGGTTC TCGATGCCGT CGAGCTCCCG CCGGACGCGG TGCTCGGGTC CGGTGTCGAC GGCACCGTCG CCCGATCGGT GCGCGAGTAC GGCCTGGTGG GTGCCGCAGC GCTCGCCGAC GGTGCGCTGG CCGGCGCGCT CGCGCTCACC GTCGACCACC TGCGCAAGCG AGAGCAGTTC GGGCGCCCGC TGGCCGCGTT CCAGGCCGTC GCACAGCAGA TCGCCGATGT GTACATCGCT TCCCGCACAC TGCACCTGGC CGCGACCAGC GCCGCGTGGC GCGTGGGCAC CGGTTCGGCC GCCGACGAGG CCACGGCCCT GGCCGCGTAC TGGCTCGCAG CGGAGGCACC GTCGGCGGCA CGGACGTGCC ATCACCTGCA CGGCGGCATC GGCGTGGACG CCACCTACCC GCTGCACCGA TTCTCCTCGG CGCTCAAGGA TCTGGTGCGG TTCGTGGGGG GTGCCACCGC CACCTTGCGC GATCTCACGA TCGCCGACCA CGACGATGCC GTCGGCACCG CCGGAGAGGG CCGCTTCATC GCGCTCACGC ACGAGCAGCG AGCCCTGCAG GCCGAGCTGC GCGACTACTT CTCCACCCTG ATGAGTTCGG ACGAGCGCAC CGCGATGCTG GTGCAGCGGC ACGGCGAGGT GTTCCGGAAC GTGGTGCGCC GCATGGGCCT CGATGGGCGG CTGGGTGTGG GCTGGCCCAC CGAGTACGGC GGGCGCGGTT TCGGCCCGAT CGAGCAGTAT CTCTTCGTCA ACGAGGCCAC CCGCGCCGAC GTCCAGCTGC CCTCGGTCAC ACTGCAGACC GTGGGCCCCA CCCTGCAAGC CTTCGGCACC GAAGAACAGA AGGCGAAGTT CCTCCCCAAA ATCCTCTCGG GCGAAGTACA TTTCGCGATC GGCTACACCG AGCCGGAGGC GGGCACCGAT CTCGCGTCGC TGCGCACGAC GGCGGTCCGC GACGGCGACC ACTACGTGGT GAACGGCCAG AAGATCTTCA CCACCGGCGG CCACGACGCC GACTACGTGT GGCTCGCTGT GCGCACGGAC CCGGATGCAC CCAAGCACAA GGGCATCTCG ATCCTCATCC TGGACACCTC CGATCCGGGG TACACCTGGA CCCCGATCAT CACCGCCGAT GGCGCGCATC ACGTGAACGC CACCTACTAC AACGACGTCC GCGTCCCCGC CGAAATGCTG GTGGGGGTCG AGAACGAGGG CTGGAAGCTG ATCACCACCC AGCTCAATCA CGAGCGGGTG ATGCTCGGAC CATCGGGCCG GATCGGGTCG TTGTACGACC GCGTGGCCGA CTGGGCCACC GAACACGGCG TCGACACCGA CCCCGATGTG GCCGCCGCGC TCGCGCAGGT GCGTGCCGCC GAGCTCGTCA ACGAGCTGCT GAACTGGCAG GTGGCCGCCG CCGAGGCCGG TGGCCCCGTG GATGTGGCGG ACGCCTCCGC CACCAAGGTA TTCGGCTCCG ACCGCATTCA GGCCCTCACC GCACTACTCG AGGATGTGGT CGGCACGCAC GGCGATCCCG GGGAGGCGGC CACCGGCGAG TTGCTGCACT GGCTCGACGT GCAGGCGAAA CGGAATCTGG TGCTCACCTT CGGCGGTGGC GTCAACGAGA TCCAGCGCGA GCTCATCGCC CTCATGGGAC TGCAACTTCC GCGGGTGCCG CGATGA
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Protein sequence | MDFHPDENQA AVAGLAADVL TRSTEQGDWR ATWTDLARAD LLGLHAPESV GGAGLGAEEM TAVLTEAGRL HCTAPLLPAL ALGIAPVAAH GTTEQQQRLL PAALSGEQLI VGALNEAGAA LPRHPRTRAE RTADGWSLTG RKVAVGYAQH AAHLLVSAST DAGAAIFVVD SGAPGLTVLP SPSSSAAPEA TVVLDAVELP PDAVLGSGVD GTVARSVREY GLVGAAALAD GALAGALALT VDHLRKREQF GRPLAAFQAV AQQIADVYIA SRTLHLAATS AAWRVGTGSA ADEATALAAY WLAAEAPSAA RTCHHLHGGI GVDATYPLHR FSSALKDLVR FVGGATATLR DLTIADHDDA VGTAGEGRFI ALTHEQRALQ AELRDYFSTL MSSDERTAML VQRHGEVFRN VVRRMGLDGR LGVGWPTEYG GRGFGPIEQY LFVNEATRAD VQLPSVTLQT VGPTLQAFGT EEQKAKFLPK ILSGEVHFAI GYTEPEAGTD LASLRTTAVR DGDHYVVNGQ KIFTTGGHDA DYVWLAVRTD PDAPKHKGIS ILILDTSDPG YTWTPIITAD GAHHVNATYY NDVRVPAEML VGVENEGWKL ITTQLNHERV MLGPSGRIGS LYDRVADWAT EHGVDTDPDV AAALAQVRAA ELVNELLNWQ VAAAEAGGPV DVADASATKV FGSDRIQALT ALLEDVVGTH GDPGEAATGE LLHWLDVQAK RNLVLTFGGG VNEIQRELIA LMGLQLPRVP R
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