Gene TBFG_13538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_13538 
Symbol 
ID5224227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp3934824 
End bp3936026 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content66% 
IMG OID640608307 
Productacyl-CoA dehydrogenase fadE26 
Protein accessionYP_001289465 
Protein GI148824711 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones292 
Plasmid unclonability p-value0.0408741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones140 
Fosmid unclonability p-value0.000000336026 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATCA GTTACACCCC GCAGCAGGAG GAGCTGCGCC GCGAGCTGCG CTCGTACTTT 
GCCACGTTGA TGACGCCGGA ACGCCGGGAG GCGCTGAGCT CGGTCCAGGG TGAATACGGC
GTCGGCAATG TCTACCGGGA GACGATCGCG CAAATGGGCC GCGACGGGTG GCTTGCGCTG
GGCTGGCCCA AGGAATACGG CGGCCAGGGC CGCTCGGCGA TGGACCAGCT GATCTTCACC
GATGAAGCCG CCATCGCCGG TGCACCGGTG CCGTTCCTGA CCATCAACAG CGTGGCGCCG
ACGATCATGG CCTACGGAAC CGACGAGCAG AAGAGGTTTT TCCTGCCCCG GATCGCCGCC
GGGGATCTGC ACTTCTCGAT CGGCTACTCC GAGCCCGGCG CCGGCACCGA CCTGGCCAAC
CTGCGCACCA CCGCGGTTCG CGACGGCGAT GACTATGTGG TCAACGGCCA GAAGATGTGG
ACCAGCCTGA TTCAGTACGC CGACTACGTC TGGTTAGCGG TACGCACCAA CCCGGAGTCT
TCTGGGGCCA AAAAACACCG TGGCATATCG GTGTTAATCG TGCCGACGAC CGCTGAGGGC
TTCTCCTGGA CTCCAGTGCA CACCATGGCC GGTCCGGACA CCAGCGCCAC CTACTACTCC
GACGTGCGGG TACCGGTGGC CAACCGGGTC GGTGAGGAAA ACGCCGGCTG GAAGCTGGTG
ACCAACCAGC TCAACCACGA GCGGGTCGCC CTGGTGTCGC CGGCACCGAT TTTCGGATGC
CTGCGCGAGG TCCGCGAATG GGCACAAAAC ACCAAGGACG CCGGCGGCAC CAGGCTGATC
GACTCGGAGT GGGTGCAGCT CAACCTGGCC CGGGTACACG CCAAGGCCGA AGTCCTCAAG
CTGATCAACT GGGAGCTGGC TTCCTCGCAA AGTGGGCCGA AGGACGCTGG ACCGTCACCG
GCCGATGCGT CGGCGGCCAA GGTGTTCGGT ACCGAGCTGG CCACCGAGGC CTACCGGCTG
CTGATGGAGG TGTTGGGCAC TGCGGCGACC CTGCGCCAGA ATTCGCCAGG CGCGTTGCTG
CGCGGCCGCG TCGAACGGAT GCACCGGGCG TGCCTGATCC TGACGTTCGG CGGCGGCACC
AACGAAGTCC AGCGCGACAT CATCGGCATG GTCGCGCTGG GACTGCCGCG AGCCAACCGC
TGA
 
Protein sequence
MRISYTPQQE ELRRELRSYF ATLMTPERRE ALSSVQGEYG VGNVYRETIA QMGRDGWLAL 
GWPKEYGGQG RSAMDQLIFT DEAAIAGAPV PFLTINSVAP TIMAYGTDEQ KRFFLPRIAA
GDLHFSIGYS EPGAGTDLAN LRTTAVRDGD DYVVNGQKMW TSLIQYADYV WLAVRTNPES
SGAKKHRGIS VLIVPTTAEG FSWTPVHTMA GPDTSATYYS DVRVPVANRV GEENAGWKLV
TNQLNHERVA LVSPAPIFGC LREVREWAQN TKDAGGTRLI DSEWVQLNLA RVHAKAEVLK
LINWELASSQ SGPKDAGPSP ADASAAKVFG TELATEAYRL LMEVLGTAAT LRQNSPGALL
RGRVERMHRA CLILTFGGGT NEVQRDIIGM VALGLPRANR