Gene Mjls_5005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_5005 
Symbol 
ID4880703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp5243153 
End bp5244331 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content67% 
IMG OID640142315 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001073260 
Protein GI126437569 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.512394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG GCTACACCCC CGAGCAGGAG GAGTTGCGCC GCGAACTGCG GTCGTACTTC 
ACCAAACTCA TGACGCCCGA GCGCGCCGAG GCCCTGGCGA GCAACGACGG TGAGATGGGC
CGCGGCAACG TCTATCGCGA GACGGTCGCG CAGATGGGCA AGGACGGCTG GCTGACGCTG
TCGTGGCCCA AGGAGTTCGG CGGCCAGGCG CGCCCGCCGA TGGACGGCCT GATCTTCAAC
GACGAGGCCG CGATCGCGAA CGTGCCGGTG CCGTTCCTGA CGATCAACAG CGTCGCGCCG
ACGATCATGG CGTTCGGCAC CGAGGACCAG AAGAAGTTCT TCCTGCCCAA GATCGCGTCG
GGAGATCTGC ACTTCTCGAT CGGTTACTCC GAACCCGGTG CGGGCACCGA CCTCGCGTCG
CTGCGCACCA CCGCGGTACG CGACGGTGAC GACTACGTCA TCAACGGCCA GAAGATGTGG
ACGTCGCTGA TCGCCTACGC CGACTACGTC TGGTTGGCGG TGCGGACCAA TCCCGAAGCC
AAGAAGCACC GCGGCATCTC GATGCTGATC GTGCCGACCA CCGCCGAGGG ATTCTCCTGG
ACACCGGTGC ACACGATGTC GGGTGTGGAC ACCAGCGCCA CCTATTACCA GGACGTCCGG
GTGCCGGTGT CGAATCTGGT CGGCGAGGAG AACGCGGGCT GGAAGCTGGT CACCAATCAG
CTCAACCACG AGCGCGTCGC GCTGGTGTCC GCGCAGCCGA TCTTCGTCGC GCTCGACGGG
GTGCGGGAGT GGGCGCAGAA CACCAAGGAC GCCCACGGCC GACGGCTGAT CGACTCCGAG
TGGGTGCAGC TGAACCTGGC CCGCGTGCAC GCCAAAGCCG AAGTCCTCAA ACTGATCAAC
TGGGAGCTCG CCTCCACCGA GGCGGCGCCG TCGCCGGCCG ACGCATCGGC GGCCAAGGTC
TTCGGCACCG AGTTGGCCAC CGAGGCCTAC CGCCTGCTGA TGGAGGTGCT GGGCACCGCG
GCCACGTTGC GCCCCAACTC CCCCGGCGCG CTGCTGCGCG GCCGCGTCGA GCGGATGCAC
CGGTCGTGCC TGATCCTGAC GTTCGGTGGC GGCACCAACG AGATCCAGCG CGACATCATC
GGCATGGTCG CGCTCGGCCT GCCCCGGGTC AACCGGTAA
 
Protein sequence
MRIGYTPEQE ELRRELRSYF TKLMTPERAE ALASNDGEMG RGNVYRETVA QMGKDGWLTL 
SWPKEFGGQA RPPMDGLIFN DEAAIANVPV PFLTINSVAP TIMAFGTEDQ KKFFLPKIAS
GDLHFSIGYS EPGAGTDLAS LRTTAVRDGD DYVINGQKMW TSLIAYADYV WLAVRTNPEA
KKHRGISMLI VPTTAEGFSW TPVHTMSGVD TSATYYQDVR VPVSNLVGEE NAGWKLVTNQ
LNHERVALVS AQPIFVALDG VREWAQNTKD AHGRRLIDSE WVQLNLARVH AKAEVLKLIN
WELASTEAAP SPADASAAKV FGTELATEAY RLLMEVLGTA ATLRPNSPGA LLRGRVERMH
RSCLILTFGG GTNEIQRDII GMVALGLPRV NR