| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2142 |
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| Symbol | |
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| ID | 5662535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2593672 |
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| End bp | 2594841 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236745 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001501997 |
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| Protein GI | 157961963 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.120399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATATTG ATTTAACGCC AGAACAGCAT CAATTGCGCT TAAAAATTCG GGATTACTTT
ACCAAGCTGA TGACACCAGA GCTCAAGGCT AAATTACGTG GAAAAGAGGG CGGAGACGAC
TATCGCGCTG TTATCGAGCA AATCGGTAAG GATGGTTGGT TAGCGGTGGG ATGGCCAAAA
GAGTTTGGTG GCCAAGGCTA TCAAGCGACT GAGCAGCTTA TTTTCTTTGA AGAAGCCAAT
ATCGCAGGTG CGCCTCTACC ATTTGTGACC ATTAGTACGG TAGGTCCCGC ATTAATGGAG
CACGGCACAG AGTATCAAAA GCAGAAGTTC TTACCGGGTA TTGCCAGAGG AGAAATCATT
TTTGCCATCG GTTATTCAGA ACCTAATGCA GGTTCTGATC TGGCTACATT GACCACGGCT
GCAAAAGTTG AACAAGAAGG TTTTGTTGTC AATGGCAACA AAATGTGGAC CTCTGGTGCT
GAGTCTGCTG ATTATATTTG GCTGGCAGCT CGAACAGATC CAGAGCAGGC GCGGCATAAA
GGTATTTCGA TTATGATCGT TGATACCCAA ACTCCAGGTT TTTCACATAC CGTGATCCCC
ACCTGTTCGA ACCCAACGGC AGCAACTTAC TATGACGACG TTGTCGTACC AAAAGAAATG
CTTGTTGGCG AGCTCAATCG GGGCTGGAAA CTGATCACTT CCCAATTAAA CCATGAGCGT
TTAGGGTTAG GAGCATGGTC AGATAAAGTG GTGAGTTTGT ACCGTAAAGT TTACCTTTGG
GCTAAGGCAA AAGATGAGCA CGGCCGATGC GCAACTGATA ATCCATGGGT GCGAAGCGCT
TTAGCCAAGT GCTATTCGCG TTTAGAAGCA ATGCGGCTGA TTAATTTTAG AATTGCCGCA
GATCTTGAGC AAGGGCAAAT GGATGTTGCG TTGGCATCAA TCACTAAAGT TTATGGTTCT
GAATCTGCAA TTGAAATATT GCGTCTGTTA CAAGATATTG TCGGCAGTAA CGGCATGGTC
CGTGAAGGTT CAAGCGCCTC ATTATTACTT GGCGAACTCG AGTATGAAGT ACGTGCTTCT
GTCACGCTGA CTTTTGGTGG TGGAACAAAT GAGATCCAGC GAGAGCTCAT TGCGCAATTT
GGATTGGGTT TACCCAGAGC ACGTAACTAA
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| Protein sequence | MYIDLTPEQH QLRLKIRDYF TKLMTPELKA KLRGKEGGDD YRAVIEQIGK DGWLAVGWPK
EFGGQGYQAT EQLIFFEEAN IAGAPLPFVT ISTVGPALME HGTEYQKQKF LPGIARGEII
FAIGYSEPNA GSDLATLTTA AKVEQEGFVV NGNKMWTSGA ESADYIWLAA RTDPEQARHK
GISIMIVDTQ TPGFSHTVIP TCSNPTAATY YDDVVVPKEM LVGELNRGWK LITSQLNHER
LGLGAWSDKV VSLYRKVYLW AKAKDEHGRC ATDNPWVRSA LAKCYSRLEA MRLINFRIAA
DLEQGQMDVA LASITKVYGS ESAIEILRLL QDIVGSNGMV REGSSASLLL GELEYEVRAS
VTLTFGGGTN EIQRELIAQF GLGLPRARN
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