| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4622 |
|---|
| Symbol | |
|---|
| ID | 4113451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 4894675 |
|---|
| End bp | 4895862 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638033773 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_641782 |
|---|
| Protein GI | 108801585 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.580586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCG GCTACACCCC CGAGCAGGAG GAGTTGCGCC GCGAACTGCG GTCGTACTTC
ACCAAACTCA TGACGCCCGA GCGCGCCGAG GCGCTCGCGA GCAACGACGG TGAGATGGGA
CGCGGCAACG TCTACCGCGA GACCGTCGCA CAGATGGGCA AGGACGGGTG GTTGACGCTG
TCGTGGCCCA AGGAGTTCGG CGGTCAGGCC CGCCCGCCGA TGGACGGCCT GATCTTCAAC
GACGAGGCCG CGATCGCAAA CGTCCCGGTG CCGTTCCTGA CGATCAACAG CGTCGCGCCG
ACGATTATGG CGTTCGGCAC CGAAGAGCAG AAGAAGTTCT TCCTGCCCAA GATCGCCTCG
GGCGATCTGC ACTTCTCCAT CGGCTACTCC GAACCCGGTG CGGGCACCGA CCTGGCGTCG
TTGCGCACCA CCGCGGTACG CGACGGCGAC GAGTACGTCA TCAACGGCCA GAAGATGTGG
ACGTCGCTGA TCGCCTACGC CGACTACGTC TGGCTTGCTG TGCGGACCAA CCCCGAGGCC
AAGAAGCACC GCGGCATCTC GATGCTCATC GTGCCCACCA CGGCCGAGGG CTTCTCCTGG
ACGCCGGTGC ACACGATGTC CGGTGTGGAC ACCAGCGCCA CCTACTACCA GGACGTGCGG
GTACCCGTCT CGAATCTGGT TGGCGAGGAG AACGCGGGCT GGAAGCTGGT CACCAACCAG
CTGAACCATG AGCGCGTCGC GTTGGTGTCG GCGCAGCCGA TCTTCGTCGC GCTCGACGGC
GTCCGGGAAT GGGCGCAGAA CACTCACATT TCGCCGGACG GGCGCGGCAG GCGGTTGATC
GACTCCGAGT GGGTGCAGCT GAACCTGGCC CGGGTACATG CCAAGGCCGA AGTCCTCAAG
CTGATCAACT GGGAGTTGGC GTCCACCGAG GCGGCGCCGT CCCCGGCCGA CGCATCGGCG
GCCAAGGTGT TCGGCACCGA ATTGGCGACC GAGGCCTACC GCCTGCTGAT GGAGGTGCTG
GGCACCGCGG CCACGCTGCG TACCAACTCC CCCGGCGCGC TGCTGCGCGG ACGCGTCGAG
CGCATGCACC GGTCCTGCCT GATCCTGACG TTCGGCGGCG GCACCAACGA GATCCAGCGC
GACATCATCG GCATGGTCGC GCTCGGCCTG CCCCGGGTCA ACCGGTAA
|
|---|
| Protein sequence | MRIGYTPEQE ELRRELRSYF TKLMTPERAE ALASNDGEMG RGNVYRETVA QMGKDGWLTL
SWPKEFGGQA RPPMDGLIFN DEAAIANVPV PFLTINSVAP TIMAFGTEEQ KKFFLPKIAS
GDLHFSIGYS EPGAGTDLAS LRTTAVRDGD EYVINGQKMW TSLIAYADYV WLAVRTNPEA
KKHRGISMLI VPTTAEGFSW TPVHTMSGVD TSATYYQDVR VPVSNLVGEE NAGWKLVTNQ
LNHERVALVS AQPIFVALDG VREWAQNTHI SPDGRGRRLI DSEWVQLNLA RVHAKAEVLK
LINWELASTE AAPSPADASA AKVFGTELAT EAYRLLMEVL GTAATLRTNS PGALLRGRVE
RMHRSCLILT FGGGTNEIQR DIIGMVALGL PRVNR
|
|---|
| |