More than 300 homologs were found in PanDaTox collection
for query gene Strop_2678 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_2886  acyl-CoA dehydrogenase domain-containing protein  89.21 
 
 
380 aa  689    Salinispora arenicola CNS-205  Bacteria  normal  0.54081  normal 
 
 
-
 
NC_009380  Strop_2678  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
380 aa  765    Salinispora tropica CNB-440  Bacteria  normal  0.26456  normal  0.0878146 
 
 
-
 
NC_009565  TBFG_13576  acyl-CoA dehydrogenase fadE29  64.86 
 
 
387 aa  511  1e-144  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000543797 
 
 
-
 
NC_013441  Gbro_0884  acyl-CoA dehydrogenase domain protein  63.82 
 
 
387 aa  504  1e-141  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3855  acyl-CoA dehydrogenase domain protein  65.27 
 
 
751 aa  492  9.999999999999999e-139  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4675  acyl-CoA dehydrogenase-like protein  62.27 
 
 
387 aa  484  1e-135  Mycobacterium sp. MCS  Bacteria  normal  0.448802  n/a   
 
 
-
 
NC_009077  Mjls_5060  acyl-CoA dehydrogenase domain-containing protein  62.02 
 
 
387 aa  481  1e-135  Mycobacterium sp. JLS  Bacteria  normal  0.714933  normal  0.840022 
 
 
-
 
NC_008705  Mkms_4761  acyl-CoA dehydrogenase domain-containing protein  62.27 
 
 
387 aa  484  1e-135  Mycobacterium sp. KMS  Bacteria  normal  0.950594  normal 
 
 
-
 
NC_008726  Mvan_5256  acyl-CoA dehydrogenase domain-containing protein  60.98 
 
 
387 aa  480  1e-134  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.34656 
 
 
-
 
NC_009338  Mflv_1510  acyl-CoA dehydrogenase domain-containing protein  60.47 
 
 
387 aa  475  1e-133  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2790  acyl-CoA dehydrogenase domain-containing protein  60.47 
 
 
743 aa  472  1e-132  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3643  acyl-CoA dehydrogenase domain protein  57.18 
 
 
390 aa  439  9.999999999999999e-123  Thermomonospora curvata DSM 43183  Bacteria  normal  0.100578  n/a   
 
 
-
 
NC_013595  Sros_8197  acyl-CoA dehydrogenase protein  56.25 
 
 
384 aa  427  1e-118  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2609  acyl-CoA dehydrogenase domain-containing protein  48.72 
 
 
401 aa  330  4e-89  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13538  acyl-CoA dehydrogenase fadE26  47.54 
 
 
400 aa  329  6e-89  Mycobacterium tuberculosis F11  Bacteria  normal  0.0408741  hitchhiker  0.000000336026 
 
 
-
 
NC_013510  Tcur_3483  acyl-CoA dehydrogenase domain protein  47.48 
 
 
387 aa  323  3e-87  Thermomonospora curvata DSM 43183  Bacteria  normal  0.650377  n/a   
 
 
-
 
NC_013441  Gbro_3955  acyl-CoA dehydrogenase domain protein  46.42 
 
 
400 aa  323  4e-87  Gordonia bronchialis DSM 43247  Bacteria  normal  0.888919  n/a   
 
 
-
 
NC_009953  Sare_2808  acyl-CoA dehydrogenase domain-containing protein  46.95 
 
 
401 aa  321  1.9999999999999998e-86  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000244181 
 
 
-
 
NC_008699  Noca_2517  acyl-CoA dehydrogenase domain-containing protein  45.2 
 
 
395 aa  317  2e-85  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2142  acyl-CoA dehydrogenase domain-containing protein  44.85 
 
 
389 aa  313  1.9999999999999998e-84  Shewanella pealeana ATCC 700345  Bacteria  normal  0.120399  n/a   
 
 
-
 
NC_009077  Mjls_5005  acyl-CoA dehydrogenase domain-containing protein  47.85 
 
 
392 aa  313  2.9999999999999996e-84  Mycobacterium sp. JLS  Bacteria  normal  0.512394  normal  0.425 
 
 
-
 
NC_008726  Mvan_5206  acyl-CoA dehydrogenase domain-containing protein  47.85 
 
 
393 aa  313  2.9999999999999996e-84  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.164971 
 
 
-
 
NC_008146  Mmcs_4622  acyl-CoA dehydrogenase-like protein  47.61 
 
 
395 aa  311  1e-83  Mycobacterium sp. MCS  Bacteria  normal  0.580586  n/a   
 
 
-
 
NC_008705  Mkms_4710  acyl-CoA dehydrogenase domain-containing protein  47.61 
 
 
395 aa  311  1e-83  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0058  acyl-CoA dehydrogenase domain protein  47.61 
 
 
402 aa  310  4e-83  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3806  acyl-CoA dehydrogenase domain protein  46.68 
 
 
394 aa  308  8e-83  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.989567  n/a   
 
 
-
 
NC_013131  Caci_2176  acyl-CoA dehydrogenase domain protein  45.45 
 
 
396 aa  302  7.000000000000001e-81  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.22711  normal 
 
 
-
 
NC_009338  Mflv_1551  acyl-CoA dehydrogenase domain-containing protein  46.58 
 
 
393 aa  301  1e-80  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.815219 
 
 
-
 
NC_009511  Swit_3317  acyl-CoA dehydrogenase domain-containing protein  44.42 
 
 
390 aa  291  2e-77  Sphingomonas wittichii RW1  Bacteria  normal  0.757034  hitchhiker  0.0000492573 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  35.15 
 
 
386 aa  206  7e-52  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  35.73 
 
 
393 aa  203  4e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_007517  Gmet_2199  Acyl-CoA dehydrogenase-like  35.01 
 
 
388 aa  202  9.999999999999999e-51  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000000079384  hitchhiker  0.00524222 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  33.83 
 
 
396 aa  199  5e-50  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  35.4 
 
 
397 aa  197  3e-49  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  34.01 
 
 
396 aa  195  1e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_009511  Swit_1850  acyl-CoA dehydrogenase domain-containing protein  33.59 
 
 
396 aa  193  3e-48  Sphingomonas wittichii RW1  Bacteria  normal  0.441994  normal 
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  34.39 
 
 
400 aa  193  5e-48  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  33.5 
 
 
396 aa  192  7e-48  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  34.3 
 
 
404 aa  192  8e-48  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  34.13 
 
 
399 aa  190  2.9999999999999997e-47  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  34.31 
 
 
402 aa  190  4e-47  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  32.02 
 
 
398 aa  190  4e-47  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  33.67 
 
 
385 aa  190  5e-47  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_008726  Mvan_4379  acyl-CoA dehydrogenase domain-containing protein  35.99 
 
 
385 aa  189  5.999999999999999e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.627573  normal 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  32.75 
 
 
396 aa  189  7e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  33.17 
 
 
398 aa  188  1e-46  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  32.02 
 
 
398 aa  188  1e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  33.17 
 
 
398 aa  188  1e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  34.66 
 
 
393 aa  188  1e-46  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  36.34 
 
 
379 aa  188  2e-46  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  35.31 
 
 
399 aa  187  3e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  32.13 
 
 
400 aa  187  4e-46  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  33.17 
 
 
393 aa  186  5e-46  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  33.74 
 
 
397 aa  186  5e-46  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  34.47 
 
 
398 aa  186  5e-46  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  33.58 
 
 
393 aa  185  1.0000000000000001e-45  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  33 
 
 
396 aa  185  1.0000000000000001e-45  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  34.98 
 
 
398 aa  185  1.0000000000000001e-45  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  34.98 
 
 
398 aa  184  2.0000000000000003e-45  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  38.3 
 
 
401 aa  184  2.0000000000000003e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_009338  Mflv_2287  acyl-CoA dehydrogenase domain-containing protein  35.99 
 
 
385 aa  184  2.0000000000000003e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  33.41 
 
 
416 aa  183  4.0000000000000006e-45  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  34.87 
 
 
398 aa  183  4.0000000000000006e-45  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  34.87 
 
 
398 aa  183  4.0000000000000006e-45  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_009565  TBFG_11963  acyl-CoA dehydrogenase fadE17  34.95 
 
 
409 aa  182  6e-45  Mycobacterium tuberculosis F11  Bacteria  normal  0.0444584  normal  0.860383 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  32.85 
 
 
452 aa  182  7e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  34.06 
 
 
398 aa  182  1e-44  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  34.06 
 
 
398 aa  182  1e-44  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  34.34 
 
 
397 aa  181  1e-44  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  33.33 
 
 
398 aa  182  1e-44  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  34.06 
 
 
398 aa  181  1e-44  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  34.06 
 
 
398 aa  181  1e-44  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  33.33 
 
 
398 aa  181  2e-44  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  33.33 
 
 
398 aa  181  2e-44  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  33.33 
 
 
398 aa  181  2e-44  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  33.81 
 
 
402 aa  181  2e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  33.33 
 
 
398 aa  181  2e-44  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
398 aa  181  2e-44  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  31.51 
 
 
397 aa  181  2.9999999999999997e-44  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5498  acyl-CoA dehydrogenase domain-containing protein  35.44 
 
 
399 aa  180  2.9999999999999997e-44  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5118  acyl-CoA dehydrogenase-like protein  35.44 
 
 
399 aa  180  2.9999999999999997e-44  Mycobacterium sp. MCS  Bacteria  normal  0.840312  n/a   
 
 
-
 
NC_008705  Mkms_5207  acyl-CoA dehydrogenase domain-containing protein  35.44 
 
 
399 aa  180  2.9999999999999997e-44  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  34.06 
 
 
402 aa  180  4e-44  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  33.67 
 
 
393 aa  179  5.999999999999999e-44  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  32.09 
 
 
398 aa  179  5.999999999999999e-44  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  33.25 
 
 
400 aa  179  7e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  33.91 
 
 
398 aa  179  8e-44  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  33.5 
 
 
400 aa  179  9e-44  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  31.84 
 
 
398 aa  179  9e-44  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_009077  Mjls_3696  acyl-CoA dehydrogenase domain-containing protein  35.89 
 
 
391 aa  179  1e-43  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8743  acyl-CoA dehydrogenase domain protein  34.32 
 
 
404 aa  178  1e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.316323 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  33.58 
 
 
393 aa  178  1e-43  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_008146  Mmcs_3683  acyl-CoA dehydrogenase-like protein  35.89 
 
 
391 aa  179  1e-43  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3756  acyl-CoA dehydrogenase domain-containing protein  35.89 
 
 
391 aa  179  1e-43  Mycobacterium sp. KMS  Bacteria  normal  0.28682  normal  0.841403 
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  33.58 
 
 
393 aa  178  1e-43  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  32.43 
 
 
398 aa  177  2e-43  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  33.17 
 
 
402 aa  177  2e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  39.63 
 
 
393 aa  177  2e-43  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2767  acyl-CoA dehydrogenase domain-containing protein  37.5 
 
 
378 aa  177  2e-43  Nocardioides sp. JS614  Bacteria  normal  0.259881  n/a   
 
 
-
 
NC_008726  Mvan_4006  acyl-CoA dehydrogenase domain-containing protein  33.17 
 
 
419 aa  178  2e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
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