More than 300 homologs were found in PanDaTox collection
for query gene Franean1_1174 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_1174  binding-protein-dependent transport systems inner membrane component  100 
 
 
367 aa  709    Frankia sp. EAN1pec  Bacteria  normal  0.0829949  normal  0.133993 
 
 
-
 
NC_007777  Francci3_3569  binding-protein-dependent transport systems inner membrane component  77.39 
 
 
345 aa  429  1e-119  Frankia sp. CcI3  Bacteria  normal  0.0917022  normal 
 
 
-
 
NC_013510  Tcur_1033  binding-protein-dependent transport systems inner membrane component  57.19 
 
 
291 aa  295  6e-79  Thermomonospora curvata DSM 43183  Bacteria  normal  0.806375  n/a   
 
 
-
 
NC_013595  Sros_9278  binding-protein-dependent transport systems inner membrane component  54.41 
 
 
291 aa  276  4e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0712  binding-protein-dependent transport systems inner membrane component  43.43 
 
 
302 aa  206  5e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.900284  n/a   
 
 
-
 
NC_013093  Amir_1232  binding-protein-dependent transport systems inner membrane component  40.85 
 
 
319 aa  194  3e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7382  binding-protein-dependent transport systems inner membrane component  40.88 
 
 
294 aa  193  5e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.916295 
 
 
-
 
NC_013131  Caci_4302  binding-protein-dependent transport systems inner membrane component  38.68 
 
 
441 aa  189  7e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0502009  hitchhiker  0.0000630788 
 
 
-
 
NC_013235  Namu_4372  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
300 aa  187  3e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  0.292938  normal 
 
 
-
 
NC_008541  Arth_3115  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
321 aa  163  5.0000000000000005e-39  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2814  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
320 aa  155  1e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00107512 
 
 
-
 
NC_008009  Acid345_0827  ABC aliphatic sulfonate transporter, inner membrane subunit  35.77 
 
 
252 aa  152  1e-35  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.819281  normal 
 
 
-
 
NC_012034  Athe_1184  binding-protein-dependent transport systems inner membrane component  37.65 
 
 
264 aa  151  2e-35  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0191984  n/a   
 
 
-
 
NC_009675  Anae109_0428  binding-protein-dependent transport systems inner membrane component  42.18 
 
 
254 aa  150  4e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0356148  normal 
 
 
-
 
NC_012803  Mlut_10010  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  40.07 
 
 
307 aa  142  9.999999999999999e-33  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00312857  n/a   
 
 
-
 
NC_010085  Nmar_1283  binding-protein-dependent transporter inner membrane protein  36.44 
 
 
252 aa  140  3.9999999999999997e-32  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0507526 
 
 
-
 
NC_011145  AnaeK_4113  binding-protein-dependent transport systems inner membrane component  38.12 
 
 
245 aa  139  7e-32  Anaeromyxobacter sp. K  Bacteria  normal  0.0627503  n/a   
 
 
-
 
NC_011891  A2cp1_4139  binding-protein-dependent transport systems inner membrane component  38.12 
 
 
245 aa  138  2e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_0407  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
263 aa  136  6.0000000000000005e-31  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1295  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
259 aa  130  5.0000000000000004e-29  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1412  binding-protein-dependent transport systems inner membrane component  41.48 
 
 
277 aa  124  2e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.72654  normal  0.222261 
 
 
-
 
NC_007760  Adeh_3998  ABC transporter, inner membrane subunit  36.61 
 
 
253 aa  120  3e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.451031  n/a   
 
 
-
 
NC_007517  Gmet_0998  binding-protein dependent transport system inner membrane protein  29.44 
 
 
260 aa  120  4.9999999999999996e-26  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.944594 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  35.15 
 
 
275 aa  119  7.999999999999999e-26  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  30.65 
 
 
261 aa  109  6e-23  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
265 aa  107  2e-22  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  30.94 
 
 
265 aa  107  2e-22  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
265 aa  107  3e-22  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
305 aa  106  6e-22  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  30.49 
 
 
265 aa  106  6e-22  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  28.95 
 
 
306 aa  105  1e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
319 aa  102  1e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  31.56 
 
 
260 aa  101  2e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_007951  Bxe_A2492  ABC aliphatic sulfonates transporter, innermembrane subunit  31.08 
 
 
280 aa  101  2e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.773133 
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  32.16 
 
 
262 aa  100  3e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1584  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
288 aa  100  4e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1745  binding-protein-dependent transport systems inner membrane component  30.68 
 
 
280 aa  100  5e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  32.9 
 
 
262 aa  100  5e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
291 aa  99.8  6e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
291 aa  99.8  6e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  32.02 
 
 
285 aa  99.8  7e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  29.28 
 
 
263 aa  99.8  7e-20  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1539  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
270 aa  99  1e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0890555  normal 
 
 
-
 
NC_012560  Avin_30900  ABC transporter, permease protein  28.31 
 
 
288 aa  99  1e-19  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1642  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
263 aa  99  1e-19  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1679  ABC transporter permease  30.6 
 
 
274 aa  98.2  2e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.451747  n/a   
 
 
-
 
NC_008060  Bcen_1083  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
270 aa  98.6  2e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1563  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
270 aa  98.6  2e-19  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0116  membrane protein  32 
 
 
281 aa  98.6  2e-19  Methylibium petroleiphilum PM1  Bacteria  normal  0.0935043  hitchhiker  0.000854026 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  28.68 
 
 
266 aa  97.4  3e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  31.12 
 
 
260 aa  97.1  4e-19  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_007005  Psyr_4875  binding-protein dependent transport system inner membrane protein  30.84 
 
 
265 aa  97.4  4e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746085  normal 
 
 
-
 
NC_009485  BBta_6691  putative ABC transporter  30.4 
 
 
288 aa  97.4  4e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1669  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
273 aa  97.1  5e-19  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.5369  normal  0.169212 
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  28.96 
 
 
264 aa  96.7  6e-19  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_008463  PA14_19510  ABC transporter permease  30.17 
 
 
274 aa  96.3  8e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3643  binding-protein-dependent transport systems inner membrane component  27.08 
 
 
252 aa  95.9  9e-19  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000799696  n/a   
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  28.1 
 
 
279 aa  95.5  1e-18  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  28.64 
 
 
264 aa  95.5  1e-18  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4705  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  30.77 
 
 
270 aa  95.9  1e-18  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  28.64 
 
 
264 aa  95.5  1e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  29.15 
 
 
263 aa  95.1  2e-18  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
295 aa  94.7  2e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  29.02 
 
 
264 aa  95.1  2e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  28.12 
 
 
264 aa  94.7  2e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5315  aliphatic sulfonates ABC transporter, permease protein  30.4 
 
 
265 aa  94.4  3e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0768  binding-protein-dependent transport systems inner membrane component  27.88 
 
 
286 aa  94  3e-18  Methylocella silvestris BL2  Bacteria  n/a    normal  0.113876 
 
 
-
 
NC_010551  BamMC406_1485  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
270 aa  94.4  3e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2837  binding-protein dependent transport system inner membrane protein  31.33 
 
 
266 aa  94  4e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.115716  normal 
 
 
-
 
NC_008390  Bamb_1464  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
270 aa  93.6  4e-18  Burkholderia ambifaria AMMD  Bacteria  normal  0.0183453  n/a   
 
 
-
 
NC_013131  Caci_3787  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
314 aa  93.6  5e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3008  binding-protein-dependent transport systems inner membrane component  27.95 
 
 
280 aa  93.2  7e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4373  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
308 aa  92.8  9e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  26.6 
 
 
286 aa  92.4  1e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_007517  Gmet_1900  binding-protein dependent transport system inner membrane protein  28.45 
 
 
252 aa  92  1e-17  Geobacter metallireducens GS-15  Bacteria  normal  0.128113  hitchhiker  0.000000000000910228 
 
 
-
 
NC_011004  Rpal_2953  binding-protein-dependent transport systems inner membrane component  31.6 
 
 
294 aa  92  1e-17  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1648  binding-protein-dependent transport systems inner membrane component  28.7 
 
 
283 aa  92  1e-17  Burkholderia phymatum STM815  Bacteria  normal  0.189471  normal  0.0804385 
 
 
-
 
NC_003296  RS03033  transmembranee ABC transporter protein  29.96 
 
 
298 aa  92  2e-17  Ralstonia solanacearum GMI1000  Bacteria  normal  0.744864  normal  0.0870544 
 
 
-
 
NC_012857  Rpic12D_4123  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
298 aa  91.3  2e-17  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
286 aa  91.3  2e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4010  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
298 aa  91.3  2e-17  Ralstonia pickettii 12J  Bacteria  normal  0.281805  normal 
 
 
-
 
NC_009439  Pmen_4321  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
264 aa  91.7  2e-17  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.154719 
 
 
-
 
NC_008688  Pden_5005  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
289 aa  92  2e-17  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6246  binding-protein-dependent transport systems inner membrane component  29.83 
 
 
289 aa  90.9  3e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.608365 
 
 
-
 
NC_011988  Avi_5058  ABC transporter permease protein  28.2 
 
 
289 aa  90.9  3e-17  Agrobacterium vitis S4  Bacteria  normal  0.987794  n/a   
 
 
-
 
NC_010501  PputW619_5055  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
287 aa  91.3  3e-17  Pseudomonas putida W619  Bacteria  normal  0.97734  normal 
 
 
-
 
NC_004578  PSPTO_2787  ABC transporter, permease protein  30.29 
 
 
282 aa  90.5  4e-17  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0328614  n/a   
 
 
-
 
NC_009720  Xaut_3453  binding-protein-dependent transport systems inner membrane component  32.74 
 
 
296 aa  89.7  6e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  0.187514  normal 
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  27.34 
 
 
277 aa  90.1  6e-17  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  28.1 
 
 
279 aa  89.7  6e-17  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_011146  Gbem_1734  binding-protein-dependent transport systems inner membrane component  29.58 
 
 
252 aa  89.7  6e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2515  binding-protein dependent transport system inner membrane protein  29.05 
 
 
282 aa  89.7  7e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.313862  normal 
 
 
-
 
NC_007492  Pfl01_3295  binding-protein dependent transport system inner membrane protein  27.56 
 
 
279 aa  89.7  7e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
291 aa  89.7  7e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1382  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
288 aa  89.7  8e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.53875  normal  0.0146473 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  26.53 
 
 
267 aa  89.4  9e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0172  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
287 aa  88.6  1e-16  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_6047  binding-protein-dependent transport systems inner membrane component  30.15 
 
 
292 aa  89  1e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.309315 
 
 
-
 
NC_010623  Bphy_3601  binding-protein-dependent transport systems inner membrane component  28.1 
 
 
292 aa  89  1e-16  Burkholderia phymatum STM815  Bacteria  normal  0.475828  normal 
 
 
-
 
NC_009439  Pmen_4330  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
276 aa  87.8  2e-16  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.936191 
 
 
-
 
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