| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3601 |
|---|
| Symbol | |
|---|
| ID | 6245147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 549462 |
|---|
| End bp | 550340 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642595374 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001859786 |
|---|
| Protein GI | 186472444 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.475828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CTTCCACGTT GCTGCCGCCC GTGCGCGCCG AATACGAGCG GCCGCTCGAA
CCCGTCGGCG ATCTTGCCGT CGAAGCACCG TTGCCCATCG CGCGGCGTCT CGCGAACCAG
TCGTGGCTCA GCAAGACGAT CATCGCGATC GTGCTGATCG CAGGCTGGGA ACTCGCCGCG
CGCGCAATCG ACAACGATCT GCTGTTGCCT ACGTTCGGTG CCACCTTCGC TGCGTTCGTG
CAGGGCATCG CATCGGGCGA ACTGCTGCAG AAGACGGCCG CATCGATGTC CGTGCTGTTG
CGCGGGTATC TGCTTGGCGT CGCGCTCGCT TTCCTGCTGA CCTCGCTCGC CGTATCGACA
CGCATCGGCC GCGACTTGCT GTCGATGCTG ACGGCGATGT TCAATCCGTT GCCGTCGATT
GCGCTGCTGC CGCTCGCGCT GCTGTGGTTC GGTCTCGGCA CGGGCAGCCT GCTGTTCGTG
CTCGTGCATG CCGTATTGTG GCCGCTTGCG CTCAACATGT ACGCGGGCTT TCGTGCGGTG
CCCGCGACAT TGCGGATGGC GGGGCGCAAC TATGGCCTGA CGGGGTTGCA CCATGTGGTG
CTGATCCTTG TGCCTGCCGC GCTGCCGTCG ATTCTTGCGG GCCTGCGCGT GGGCTGGGCA
TTCGCATGGC GCACGCTGAT CGCAGCCGAA CTGGTGTTCG GTGCGAGTAG CGGAAACGGC
GGACTGGGCT GGTACATCTT CCAGAACCGC AACGAGCTTT ACACCGACCG CGTATTTGGG
GGGCTCGCCG CGGTGATCGC GATTGGCCTG CTCGTCGAGC ATCTGGTGTT CGACACGCTG
GAACGTATGA CGGTGCGCCG CTGGGGTCTG CAGCAGTGA
|
|---|
| Protein sequence | MSTPSTLLPP VRAEYERPLE PVGDLAVEAP LPIARRLANQ SWLSKTIIAI VLIAGWELAA
RAIDNDLLLP TFGATFAAFV QGIASGELLQ KTAASMSVLL RGYLLGVALA FLLTSLAVST
RIGRDLLSML TAMFNPLPSI ALLPLALLWF GLGTGSLLFV LVHAVLWPLA LNMYAGFRAV
PATLRMAGRN YGLTGLHHVV LILVPAALPS ILAGLRVGWA FAWRTLIAAE LVFGASSGNG
GLGWYIFQNR NELYTDRVFG GLAAVIAIGL LVEHLVFDTL ERMTVRRWGL QQ
|
|---|
| |