| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_9278 |
|---|
| Symbol | |
|---|
| ID | 8672626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 10233878 |
|---|
| End bp | 10234753 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003344639 |
|---|
| Protein GI | 271970443 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTG ACCAGGCAAC CCCCGACATC CATGCCCGGC AGCTCGCCGG GCTCGACGCG
CTGGAGCTGG GCGGTGGCAC GCGCGGCGGG CTCGCCCCCC GGATCTGGGG CCGCGTCTGG
CCGATGGCCC TGGCGGTCGG CATGGTGCTG GCGATCTGGC AGGCCGTGGT GTGGGCCGGC
TTCTGGCCGG ACTACGTCTT CGCCGGGCCC TCCGAGGTGG TCCCGGTCCT CGCAGACCGC
CTGACCAGCG GCGAATACTG GGAGGCCATC GGTGTGACGA TGCGCCGCGC GGTGACCGGC
TTCGCCGTGT CGGTGCTGGT CGGGCTGGTC CTGGGCGCCC TGGTGTCCCG GATCCGGGTG
CTCCGGGCCG CCTTCGGCTC ACTGATCACC GGCCTGCAGA CCATGCCGTC GATCGCCTGG
TTCCCGCTGG CCATCCTGCT GTTCGGGCTG ACCGAGAGCG CGATCACCTT CGTGGTCATC
CTCGGCGCCG CGCCGTCCAT CGCGAACGGC CTGATCGGCG GGGTGGACTA CACGCCGCCG
ATCCTGCTGC GCGCCGGGCA CGTGCTCGGC TTCCGCCGCC TCCAGCTCTA CCGCCACGTG
ATCCTGCCGG CGTCGCTGCC GTCGTTCCTC GCCGGGCTCA AGCAGGGCTG GGCCTTCGCC
TGGCGCTCGC TGATGGCCGG TGAGCTGGTG GTCATCATCG CCCACCAGTC CTCGCTGGGC
GAGCGGCTCT ACTACGACCG CGAGCTCGCC GACTCGGCCG GCCTGCTCGC CACCATGATC
GTGATTCTGA TCATCGGCAT CGGGGTGGAC CTGCTGTTCG AGACGGCCGA CAACTCTCTG
CGCCGCCGCT GGGGTCTCCA GCAGGTGCGC AACTGA
|
|---|
| Protein sequence | MAVDQATPDI HARQLAGLDA LELGGGTRGG LAPRIWGRVW PMALAVGMVL AIWQAVVWAG
FWPDYVFAGP SEVVPVLADR LTSGEYWEAI GVTMRRAVTG FAVSVLVGLV LGALVSRIRV
LRAAFGSLIT GLQTMPSIAW FPLAILLFGL TESAITFVVI LGAAPSIANG LIGGVDYTPP
ILLRAGHVLG FRRLQLYRHV ILPASLPSFL AGLKQGWAFA WRSLMAGELV VIIAHQSSLG
ERLYYDRELA DSAGLLATMI VILIIGIGVD LLFETADNSL RRRWGLQQVR N
|
|---|
| |