| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5315 |
|---|
| Symbol | ssuC |
|---|
| ID | 1187000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 6043752 |
|---|
| End bp | 6044549 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637396634 |
|---|
| Product | aliphatic sulfonates ABC transporter, permease protein |
|---|
| Protein accession | NP_795046 |
|---|
| Protein GI | 28872427 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA GTGCTTCGCA ACGCATCGTT CATCGACTGG CGCCCTGGGC ACTTCCAGTC
CTGTTATTGG CCATCTGGCA GCTGTCAGTC AGTGCCGGCT GGTTATCCAC ACGCATTCTG
CCCGCACCCA GCGCAGTCAT TGAAGCGGGT GCCACGCTGG TTGCCAGCGG CGAAATCTGG
ACCCACCTGG CGATCAGCGG CTGGCGCGCC GGAATCGGCT TTGCCATCGG CGGCGGCATA
GGTCTGGCAC TGGGCTTTAT TACCGGCCTG AGCAAATGGG GCGAACGCTT GCTGGACAGC
TCGGTGCAGA TGATCCGTAA CGTGCCGCAC CTGGCGCTGA TCCCGCTGGT CATCCTGTGG
TTCGGCATCG ACGAGACCGC GAAGATATTT CTGGTCGCAC TGGGCACGCT GTTCCCGATT
TACCTGAACA CCTACCACGG CATCCGCAAC ATCGATCCGG CGCTGGTAGA AATGTCCCGC
AGCTACGGCT TGTCCGGCTT CAGCCTGTTT CGGCATGTGA TCCTGCCGGG CGCCATGCCT
TCGATTCTGG TGGGCGTACG CTTTGCGCTG GGCTTCATGT GGCTGACGTT GATCGTGGCG
GAAACCATTT CGGCCAGTTC CGGCATCGGA TATCTGGCAA TGAATGCGCG GGAATTTCTG
CAGACCGACA TCGTGGTGCT GGCCATAGTG TTGTACGCAG TCCTCGGCAA GCTGGCCGAT
CTGGCGGCGC GCGGCCTTGA GCGTGTCTGC CTGCGCTGGC ATCCGGCCTA TCAAGTGAGC
AAAGGCGGTG CCGCATGA
|
|---|
| Protein sequence | MSLSASQRIV HRLAPWALPV LLLAIWQLSV SAGWLSTRIL PAPSAVIEAG ATLVASGEIW
THLAISGWRA GIGFAIGGGI GLALGFITGL SKWGERLLDS SVQMIRNVPH LALIPLVILW
FGIDETAKIF LVALGTLFPI YLNTYHGIRN IDPALVEMSR SYGLSGFSLF RHVILPGAMP
SILVGVRFAL GFMWLTLIVA ETISASSGIG YLAMNAREFL QTDIVVLAIV LYAVLGKLAD
LAARGLERVC LRWHPAYQVS KGGAA
|
|---|
| |