More than 300 homologs were found in PanDaTox collection
for query gene Caci_6561 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_6561  short-chain dehydrogenase/reductase SDR  100 
 
 
240 aa  468  1.0000000000000001e-131  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4482  short-chain dehydrogenase/reductase SDR  49.37 
 
 
244 aa  223  3e-57  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00000000123251 
 
 
-
 
NC_009664  Krad_2036  short-chain dehydrogenase/reductase SDR  53.59 
 
 
259 aa  197  9e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3217  short-chain dehydrogenase/reductase SDR  43.18 
 
 
253 aa  155  7e-37  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3908  short-chain dehydrogenase/reductase SDR  43.33 
 
 
272 aa  153  2e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.106718  normal  0.186536 
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  50.25 
 
 
260 aa  152  4e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1481  short-chain dehydrogenase/reductase SDR  45.31 
 
 
239 aa  148  1.0000000000000001e-34  Roseiflexus sp. RS-1  Bacteria  normal  0.175599  normal 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  40.72 
 
 
248 aa  146  4.0000000000000006e-34  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  44.62 
 
 
317 aa  145  5e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2071  short-chain dehydrogenase/reductase SDR  42.19 
 
 
239 aa  143  3e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.420603  normal 
 
 
-
 
NC_011884  Cyan7425_0761  short-chain dehydrogenase/reductase SDR  42.02 
 
 
277 aa  141  9.999999999999999e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  41.08 
 
 
293 aa  139  3.9999999999999997e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  43.16 
 
 
248 aa  139  3.9999999999999997e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_009523  RoseRS_1352  short-chain dehydrogenase/reductase SDR  44.44 
 
 
272 aa  137  2e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.15703  normal 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  42.13 
 
 
252 aa  134  9e-31  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3335  short-chain dehydrogenase/reductase SDR  41.86 
 
 
246 aa  134  1.9999999999999998e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  34.67 
 
 
261 aa  134  1.9999999999999998e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_1302  short-chain dehydrogenase/reductase SDR  46.6 
 
 
258 aa  133  3e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.12307  hitchhiker  0.00977234 
 
 
-
 
NC_007517  Gmet_2206  Short-chain dehydrogenase/reductase SDR  40.31 
 
 
254 aa  132  3.9999999999999996e-30  Geobacter metallireducens GS-15  Bacteria  normal  0.0824665  hitchhiker  0.00853535 
 
 
-
 
NC_011729  PCC7424_0301  short-chain dehydrogenase/reductase SDR  42.56 
 
 
305 aa  132  5e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0783167 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  42.93 
 
 
258 aa  131  1.0000000000000001e-29  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3758  short-chain dehydrogenase/reductase SDR  38.27 
 
 
299 aa  131  1.0000000000000001e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.297651  normal 
 
 
-
 
NC_009832  Spro_3865  short-chain dehydrogenase/reductase SDR  40.39 
 
 
247 aa  131  1.0000000000000001e-29  Serratia proteamaculans 568  Bacteria  normal  0.269971  normal 
 
 
-
 
NC_010172  Mext_0292  short-chain dehydrogenase/reductase SDR  43.64 
 
 
262 aa  130  2.0000000000000002e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.469065 
 
 
-
 
NC_007948  Bpro_3168  short chain dehydrogenase  39.09 
 
 
270 aa  130  2.0000000000000002e-29  Polaromonas sp. JS666  Bacteria  normal  0.273274  normal  0.685188 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  33.33 
 
 
264 aa  128  7.000000000000001e-29  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  39.57 
 
 
330 aa  128  1.0000000000000001e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_009439  Pmen_4578  short-chain dehydrogenase/reductase SDR  38.38 
 
 
264 aa  127  2.0000000000000002e-28  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1007  short-chain dehydrogenase/reductase SDR  39.26 
 
 
245 aa  127  2.0000000000000002e-28  Sphingomonas wittichii RW1  Bacteria  normal  0.553727  normal  0.0273902 
 
 
-
 
NC_010087  Bmul_5635  short-chain dehydrogenase/reductase SDR  39.46 
 
 
247 aa  126  3e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  40 
 
 
267 aa  126  3e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  39.15 
 
 
330 aa  126  3e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_009664  Krad_1025  short chain dehydrogenase  44.09 
 
 
274 aa  125  5e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.150864  normal  0.667254 
 
 
-
 
NC_007953  Bxe_C0635  putative short-chain dehydrogenase/reductase  40.42 
 
 
246 aa  125  6e-28  Burkholderia xenovorans LB400  Bacteria  normal  0.660542  normal  0.0297002 
 
 
-
 
NC_013595  Sros_8706  short-chain dehydrogenase/reductase SDR  37.89 
 
 
255 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5584  short-chain dehydrogenase/reductase SDR  37.82 
 
 
344 aa  124  1e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.753226  normal  0.910238 
 
 
-
 
NC_008009  Acid345_0026  short-chain dehydrogenase/reductase SDR  37.78 
 
 
249 aa  124  2e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.94443  normal 
 
 
-
 
NC_008527  LACR_1627  oxidoreductase  38.58 
 
 
255 aa  123  2e-27  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1406  short-chain dehydrogenase/reductase SDR  38.5 
 
 
267 aa  124  2e-27  Spirosoma linguale DSM 74  Bacteria  normal  0.0615665  normal  0.271714 
 
 
-
 
NC_010725  Mpop_0368  short-chain dehydrogenase/reductase SDR  42.27 
 
 
248 aa  123  2e-27  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4239  short chain dehydrogenase  39 
 
 
268 aa  123  3e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0369625 
 
 
-
 
NC_008254  Meso_3901  short-chain dehydrogenase/reductase SDR  40.76 
 
 
280 aa  123  3e-27  Chelativorans sp. BNC1  Bacteria  normal  0.962145  n/a   
 
 
-
 
NC_011831  Cagg_0747  short-chain dehydrogenase/reductase SDR  39.34 
 
 
239 aa  123  3e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.785555  normal  0.162372 
 
 
-
 
NC_008025  Dgeo_0818  short chain dehydrogenase  34.96 
 
 
242 aa  122  4e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1249  short chain dehydrogenase  42.78 
 
 
279 aa  121  9.999999999999999e-27  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4845  short-chain dehydrogenase/reductase SDR  38.61 
 
 
252 aa  120  9.999999999999999e-27  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01927  putative oxidoreductase  38.16 
 
 
252 aa  121  9.999999999999999e-27  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.160278  n/a   
 
 
-
 
NC_008254  Meso_3902  short-chain dehydrogenase/reductase SDR  38.22 
 
 
246 aa  121  9.999999999999999e-27  Chelativorans sp. BNC1  Bacteria  normal  0.809389  n/a   
 
 
-
 
NC_011004  Rpal_0852  short-chain dehydrogenase/reductase SDR  35.4 
 
 
280 aa  120  9.999999999999999e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1839  glucose 1-dehydrogenase  31.76 
 
 
263 aa  120  1.9999999999999998e-26  Staphylococcus epidermidis RP62A  Bacteria  normal  0.0372378  n/a   
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  36.24 
 
 
254 aa  120  1.9999999999999998e-26  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
NC_007760  Adeh_3205  short-chain dehydrogenase/reductase SDR  41.36 
 
 
244 aa  120  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3255  short-chain dehydrogenase/reductase SDR  35.22 
 
 
262 aa  120  1.9999999999999998e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.207826 
 
 
-
 
NC_013132  Cpin_5731  short-chain dehydrogenase/reductase SDR  42.41 
 
 
246 aa  120  1.9999999999999998e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.836966 
 
 
-
 
NC_007348  Reut_B5463  Short-chain dehydrogenase/reductase SDR  39.71 
 
 
251 aa  119  3e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.230582  n/a   
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  40.44 
 
 
258 aa  119  3e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011738  PCC7424_5709  short-chain dehydrogenase/reductase SDR  34.41 
 
 
347 aa  119  3.9999999999999996e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_1782  3-ketoacyl-(acyl-carrier-protein) reductase  36.8 
 
 
244 aa  119  3.9999999999999996e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.788783  normal 
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  35.8 
 
 
249 aa  119  4.9999999999999996e-26  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_007511  Bcep18194_B0563  Short-chain dehydrogenase/reductase SDR  39.06 
 
 
252 aa  119  4.9999999999999996e-26  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3239  short-chain dehydrogenase/reductase SDR  41.67 
 
 
258 aa  119  4.9999999999999996e-26  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.703839 
 
 
-
 
NC_008541  Arth_3310  short-chain dehydrogenase/reductase SDR  39.89 
 
 
276 aa  119  4.9999999999999996e-26  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  37.45 
 
 
332 aa  119  4.9999999999999996e-26  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_011757  Mchl_0336  short-chain dehydrogenase/reductase SDR  44.04 
 
 
248 aa  119  6e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1552  short-chain dehydrogenase/reductase SDR  41.97 
 
 
246 aa  118  7e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1575  short-chain dehydrogenase/reductase SDR  41.97 
 
 
246 aa  118  7e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009425  Ent638_4222  short-chain dehydrogenase/reductase SDR  40.21 
 
 
242 aa  118  7.999999999999999e-26  Enterobacter sp. 638  Bacteria  normal  0.186526  normal 
 
 
-
 
NC_013946  Mrub_1117  short-chain dehydrogenase/reductase SDR  36.2 
 
 
233 aa  118  9e-26  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.000000223483  normal  0.996665 
 
 
-
 
NC_013132  Cpin_2887  short-chain dehydrogenase/reductase SDR  35.5 
 
 
251 aa  117  9.999999999999999e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.755812  normal 
 
 
-
 
NC_011886  Achl_3010  short-chain dehydrogenase/reductase SDR  35.68 
 
 
276 aa  117  9.999999999999999e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.000215509 
 
 
-
 
NC_008009  Acid345_2502  short-chain dehydrogenase/reductase SDR  36.95 
 
 
279 aa  117  9.999999999999999e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.729969 
 
 
-
 
NC_009921  Franean1_3710  short-chain dehydrogenase/reductase SDR  42.7 
 
 
262 aa  117  9.999999999999999e-26  Frankia sp. EAN1pec  Bacteria  normal  0.583089  normal 
 
 
-
 
NC_009667  Oant_2226  short-chain dehydrogenase/reductase SDR  39.39 
 
 
248 aa  117  9.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_5046  short-chain dehydrogenase/reductase SDR  41.21 
 
 
291 aa  117  1.9999999999999998e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2737  short-chain dehydrogenase/reductase SDR  39.3 
 
 
245 aa  117  1.9999999999999998e-25  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1073  thiamine pyrophosphate enzyme, central region  35.5 
 
 
847 aa  117  1.9999999999999998e-25  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1313  short-chain dehydrogenase/reductase SDR  37 
 
 
262 aa  117  1.9999999999999998e-25  Spirosoma linguale DSM 74  Bacteria  normal  0.133593  normal  0.554394 
 
 
-
 
NC_009675  Anae109_1109  short-chain dehydrogenase/reductase SDR  38.84 
 
 
254 aa  117  1.9999999999999998e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.00727999  normal  0.180483 
 
 
-
 
NC_009512  Pput_3738  short-chain dehydrogenase/reductase SDR  40.78 
 
 
245 aa  117  1.9999999999999998e-25  Pseudomonas putida F1  Bacteria  normal  0.880926  normal 
 
 
-
 
NC_014230  CA2559_04715  Short-chain dehydrogenase/reductase SDR  36.61 
 
 
249 aa  117  1.9999999999999998e-25  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.863639  n/a   
 
 
-
 
NC_013526  Tter_2119  short-chain dehydrogenase/reductase SDR  35.9 
 
 
257 aa  117  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2450  3-oxoacyl-(acyl-carrier-protein) reductase  36.75 
 
 
249 aa  117  1.9999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013745  Htur_4636  short-chain dehydrogenase/reductase SDR  40.21 
 
 
254 aa  117  1.9999999999999998e-25  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_010501  PputW619_3131  short-chain dehydrogenase/reductase SDR  39.81 
 
 
245 aa  117  1.9999999999999998e-25  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1946  short-chain dehydrogenase/reductase SDR  41.85 
 
 
299 aa  116  3e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5554  short-chain dehydrogenase/reductase SDR  40.11 
 
 
295 aa  116  3e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.579466 
 
 
-
 
NC_007802  Jann_1321  short-chain dehydrogenase/reductase SDR  37.97 
 
 
282 aa  116  3e-25  Jannaschia sp. CCS1  Bacteria  normal  0.889604  normal 
 
 
-
 
NC_011693  PHATRDRAFT_16295  predicted protein  38.04 
 
 
237 aa  116  3e-25  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0303319  n/a   
 
 
-
 
NC_008726  Mvan_0944  short chain dehydrogenase  38.39 
 
 
294 aa  116  3e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.296729  normal 
 
 
-
 
NC_013744  Htur_3779  short-chain dehydrogenase/reductase SDR  38.02 
 
 
266 aa  116  3e-25  Haloterrigena turkmenica DSM 5511  Archaea  hitchhiker  0.00111461  n/a   
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  32.22 
 
 
230 aa  116  3.9999999999999997e-25  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11068  oxidoreductase  36.87 
 
 
301 aa  115  3.9999999999999997e-25  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.205536 
 
 
-
 
NC_009664  Krad_2573  short-chain dehydrogenase/reductase SDR  42.93 
 
 
246 aa  115  3.9999999999999997e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2479  short chain dehydrogenase  39.57 
 
 
279 aa  116  3.9999999999999997e-25  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_32520  Short-chain dehydrogenase/reductase SDR protein  41.21 
 
 
278 aa  115  5e-25  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5405  short-chain dehydrogenase/reductase SDR  35.48 
 
 
273 aa  115  5e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0135056  normal  0.0706675 
 
 
-
 
NC_011729  PCC7424_5076  short chain dehydrogenase  36.45 
 
 
339 aa  115  6e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.5503 
 
 
-
 
NC_008639  Cpha266_0764  short-chain dehydrogenase/reductase SDR  36.29 
 
 
270 aa  115  6.9999999999999995e-25  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.4598  n/a   
 
 
-
 
NC_012850  Rleg_2480  short-chain dehydrogenase/reductase SDR  36.92 
 
 
245 aa  115  6.9999999999999995e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0293  short chain dehydrogenase  35.96 
 
 
267 aa  115  6.9999999999999995e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
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