Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_01927 |
Symbol | |
ID | 6775437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2074983 |
End bp | 2075741 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642755363 |
Product | putative oxidoreductase |
Protein accession | YP_002126225 |
Protein GI | 196156736 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.160278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGTG TTTTAGCAAA TAACATCAGC GGTAAGGTCG TTGTTATCAC TGGTGGTAGC AGCGGTTTAG GCGAGACCAC GGCAAGACAT TTAGCCAGCC TTGGCGCATC TGTTGTTTTA GGTGCCCGAC GCATCGACAA GCTTGAAGCT ATTGCTGCTG ACATACGCGC AGCGGGCGGA GAAGTTGCGG TTCAAGCGAC AGATGTGACT AGCCAGGACG AAGTGAAGGC CCTTGTAAAT CTTGCACAAG AGCGCTTCGG TAAAGTTGAT GTGGTTATCA ACAATGCAGG GTTAATGGCG ATTGCACCGT TAGCTGAGAC TCGAGTTGAC GAATGGGATC GCATGATTGA CATCAACGTT AAAGGTCTGC TGTATGGAGT AGCCGCAGCG CTTCCGATCT TTCAGGAACA GGGATCCGGC CACTTTATCA ATATTTCGTC CGTAGCGGGT ATCAAAGTAT TCAGTCCCGG CGGCACGGTT TATAGCGGAA CCAAATTCGC TGTTCGCGCT ATTGCCGAAG GCTTGCGCCA TGAAGTTGGG GGTAAAATTC GTTCAACAAT CATTTCACCA GGTGCAGTCG AATCTGAATT AAAACATGGA AGTTCAGATA CTCAGGGTGC AGCCTTTGTA AAAGATTTTT ATCAGCAAAA TGAAATTCCA TCTGAATCTG TAGCTCGTGC TATCGCATAC GCAATTGAGC AGCCTGCGGA TGTGGATATT AACGAGATTG TTCTGCGCCC AACAGTTCAA GAATTTTAA
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Protein sequence | MSSVLANNIS GKVVVITGGS SGLGETTARH LASLGASVVL GARRIDKLEA IAADIRAAGG EVAVQATDVT SQDEVKALVN LAQERFGKVD VVINNAGLMA IAPLAETRVD EWDRMIDINV KGLLYGVAAA LPIFQEQGSG HFINISSVAG IKVFSPGGTV YSGTKFAVRA IAEGLRHEVG GKIRSTIISP GAVESELKHG SSDTQGAAFV KDFYQQNEIP SESVARAIAY AIEQPADVDI NEIVLRPTVQ EF
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