| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_1109 |
|---|
| Symbol | |
|---|
| ID | 5374011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 1258097 |
|---|
| End bp | 1258861 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640842617 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001378301 |
|---|
| Protein GI | 153003976 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00727999 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.180483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATACG ATCTCGGCGG CAGGGTCGCG CTCGTGACGG GCGCGACCTC GGGGTTCGGC
GCGGCGTGCG CGGAGGCGCT GCTGCGCGCT GGGGCGAAGG TGATCGCCGC CGGACGGCGC
GAGGACCGCC TGCGGGCGCT CGCGGCCACC GGCGGAGACC GGGTCCACGC GGTCGCGCTC
GACGTCCGGG ATCGCGCCGC GGTGGAGCGC GCCATCGCGG GGCTGCCCGC GGCGTTCGCG
GCGGTGGACG TGCTGGTGAA CAACGCGGGG CTCGCGCTCG GCCTCGAGCC GGCGCAGCGC
GCCTCCCTCG ACGAGTGGGA GACGATGATC GCCACGAACT GCACGGGGCT CGTCACGGTC
ACGCGCGCGG TGCTGCCCGG CATGGTGGAG CGGAACCGGG GCCACGTCGT GAACATCGGC
TCCGTGGCGG GCAGCTACCC CTACCCGGGC GGCAACGTGT ACGGCGCGAC GAAGGCGTTC
GTGCGGCAGT TCTCGCTCAA CCTGCGCTCC GACCTGCTCG GCACGGCCCT CCGGGTCACG
TCCATCGAGC CGGGCATGGC CGAGACCGAG TTCTCGCTCG TCCGGTTCAG CGGCGACCCC
GAGAAGGCGA AGAAGGTCTA CGAGGGCGTC ACGCCGCTCT CCGGAGAGGA CGTCGCCGAC
GCGATCCTGT GGGCGGTCAC CCGCCCGGCG CACGTGAACG TGAACACGAT GGAGCTCATG
CCGGTCCAGC AGGCGTTCGC CCCGTTCGCG GTGTCGCGGA GGTAG
|
|---|
| Protein sequence | MAYDLGGRVA LVTGATSGFG AACAEALLRA GAKVIAAGRR EDRLRALAAT GGDRVHAVAL
DVRDRAAVER AIAGLPAAFA AVDVLVNNAG LALGLEPAQR ASLDEWETMI ATNCTGLVTV
TRAVLPGMVE RNRGHVVNIG SVAGSYPYPG GNVYGATKAF VRQFSLNLRS DLLGTALRVT
SIEPGMAETE FSLVRFSGDP EKAKKVYEGV TPLSGEDVAD AILWAVTRPA HVNVNTMELM
PVQQAFAPFA VSRR
|
|---|
| |