| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3902 |
|---|
| Symbol | |
|---|
| ID | 4181874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 4204325 |
|---|
| End bp | 4205065 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638069794 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_676434 |
|---|
| Protein GI | 110636226 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.809389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA ACATCAAGGA CAAGGTGGTC GTCATCACCG GCGCGTCGAG CGGGCTGGGC
GCGGAAACCG CCCGCCATCT CGTGCGCGAA GGGGCGAAGG TGGTGCTGGG CGCGCGGCGT
CTCGACCGGC TCGAGGCGCT GGCGAAGGAA CTGAGTCTTG GTGAGGAGGC TATCTTCAAG
GTCGATGTCA CCGACCGGGA GCAGGTTAAG GCCTTTGTCG ACCACGCGGT CAAGACCCAG
GGCAAGATTG ACGTGATGAT CAACAATGCC GGGATCATGC CGCTGGCGCC GCTGGAGATG
ATGCGCTTCG ACGAATGGGA CCAGTGCATC GACGTCAACA TCAAGGGCGT ACTCTGGGGC
ATCGCGGCAG CACTTCCTTT CTTCAAGGAG CAAAAGAGCG GCCAGTTCAT TAACGTCTCG
TCGGTCGCCG GCCACACGAT CGGCGCCGGC GGCGCGATCT ATTCGGCGAC GAAGTATTCG
GTGCGCGTGA TCTCGGAAGC ACTGCGCAAG GAGGTCAAGC CCTACAACAT CCGCACCACC
ATTCTGTCGC CCGGTGCCGT CGACACGGAG CTTCCCGGTT CGGTTGGCGC CCCTGGGGTC
TCGGAGGCCG TCGCCGGCTT CTATCATCAA ACCGCCATTC CCGCCGACAG CTTCGCCCGC
TGCGTCCTCT TCGCCATGAG CCAGCCCGAG AACGTCGACA TCAACGAAAT CCTGTTTCGG
CCGACAGCGC AGGAACTCTG A
|
|---|
| Protein sequence | MTENIKDKVV VITGASSGLG AETARHLVRE GAKVVLGARR LDRLEALAKE LSLGEEAIFK
VDVTDREQVK AFVDHAVKTQ GKIDVMINNA GIMPLAPLEM MRFDEWDQCI DVNIKGVLWG
IAAALPFFKE QKSGQFINVS SVAGHTIGAG GAIYSATKYS VRVISEALRK EVKPYNIRTT
ILSPGAVDTE LPGSVGAPGV SEAVAGFYHQ TAIPADSFAR CVLFAMSQPE NVDINEILFR
PTAQEL
|
|---|
| |