| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2479 |
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| Symbol | |
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| ID | 8133425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2846220 |
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| End bp | 2847059 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865761 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003018046 |
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| Protein GI | 253688856 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAA AAGTTATTCT GGTGACTGGC GCCTCCTCGG GGATTGGTGA AGCGACCGTT
ATGCGTTTAA AGGCTGCCGG CCATACTATT TATGCTGCTG CTCGTCGGGT CGAGAAGATT
CAGAAACTGG CAGAGGCGGG GATACGGGTA CTGCCGCTGG ATGTGACAGA GAGTGTCTCG
ATACAGACGG TGGTGGATAC CATCATTACC GAATGTGGGC GTATCGACGT TGTGGTAAAC
AATGCGGGTT ATGGTTCCTA TGGCGCTGTG GAAGAGGTGT CTCTAGAGGA AGGACGCGCC
CAGTTTGAGG TGAACGTCTT TGGTGCAGTA CAGCTAACGC AACGGGTACT GCCGCATATG
CGGGCACAAC GTTCTGGCAC CGTGATTAAC ATTACCTCGA TGGGAGGGAA GATTTATACA
CCTCTCGGTG CCTGGTATCA CGGAACCAAA TTTGCACTGG AAGCGATCAG CGACTGCCTG
CGTCTGGAAG TGGAGCCTTT CGGTATTGAT GTCGTGGTCA TTGAACCCGG TGGCATTAAA
ACCGAGTGGG CAGATATTGC CGCCGCGAAA CTATTGGGTG TATCAGGGGA CGGAGCCTAT
GCAAAACAGG CACAGGCGAT GGCCGATTCC ATGGTGAGTG AAAGTAGCCG GAAACGCCAG
TCTTCCCCGT ATGTGATTGC GGACACTATC GCTCTGGCAG TGAGCGCTCG TCGGCCCAAA
ACACGCTATG CCGTCGGTTT TGGTGCAAAG CCGATAATGT GTATACGTCG GCTGCTATCA
GACCGTGCCT TTGACCGCTT CATGCGTATG GCGACCGGTA TTTCTCGCTC AACTAAATGA
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| Protein sequence | MKSKVILVTG ASSGIGEATV MRLKAAGHTI YAAARRVEKI QKLAEAGIRV LPLDVTESVS
IQTVVDTIIT ECGRIDVVVN NAGYGSYGAV EEVSLEEGRA QFEVNVFGAV QLTQRVLPHM
RAQRSGTVIN ITSMGGKIYT PLGAWYHGTK FALEAISDCL RLEVEPFGID VVVIEPGGIK
TEWADIAAAK LLGVSGDGAY AKQAQAMADS MVSESSRKRQ SSPYVIADTI ALAVSARRPK
TRYAVGFGAK PIMCIRRLLS DRAFDRFMRM ATGISRSTK
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