Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5731 |
Symbol | |
ID | 8361911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7293081 |
End bp | 7293821 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644967872 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003125353 |
Protein GI | 256424700 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.836966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA ATGTAACAGG AAAAGTAGTG TTAATAACAG GTGCGAGTAG TGGCATTGGT GAGGCAACTG CCTTATTGCT GGCAGAGAAA GGAGCAAAGG TGGTACTTGG CGCCAGAAGG GAAGATAGAT TACAGGCATT GGCGGCACGT ATTATAGCAG CAGGCGGAGC CGTGATCTAT GCCGTGACGG ATGTAAAGAA ACGAGCTGAC CTCACAGCCC TGGTCAGTCT GGCACTTGCA CATTTCGGCC GACTGGACGT ACTGATAAAT AATGCCGGTA TCGCTTCCTT ATCACCTATG GATCATGTCA CAGTGGATGA ATGGGATGAA ATGATTGATG TGAACATCCG GGGTGTATTA CATGGAATAG CGGCGGGACT GCCGGTTTTT CGTCAACAGA AAAGCGGGCA TTTTATCAAT GTCGCTTCTA CAGCAGGACT GAAGATCATA CCAAACATGG GCGTATATGC GGCTACTAAA TCGGCGGTCA GGTTTATTTC AGAAGGACTG CGGCAGGAGG CAGGCCCTGA TCTTAGAGTT ACGGTGATTT CACCCGGATA TACCCAGACT GAGTTAGGTA ACGGTATGTC CAACCAGGAG CTGAGAGCAC AGACTGCTGC AGGTATGGAA AAGATGGCCA TTGCTCCGGG AGCCATCGCG GCAGGTATTT TGTATGCTAT TGAACAGCCG GCAGCAGTCG ATGTGAATGA ACTCGTTATT CGCCCCACTG CACAGGCATA G
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Protein sequence | MENNVTGKVV LITGASSGIG EATALLLAEK GAKVVLGARR EDRLQALAAR IIAAGGAVIY AVTDVKKRAD LTALVSLALA HFGRLDVLIN NAGIASLSPM DHVTVDEWDE MIDVNIRGVL HGIAAGLPVF RQQKSGHFIN VASTAGLKII PNMGVYAATK SAVRFISEGL RQEAGPDLRV TVISPGYTQT ELGNGMSNQE LRAQTAAGME KMAIAPGAIA AGILYAIEQP AAVDVNELVI RPTAQA
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