More than 300 homologs were found in PanDaTox collection
for query gene CPR_1574 on replicon NC_008262
Organism: Clostridium perfringens SM101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_1857  major facilitator transporter  96.63 
 
 
566 aa  1083    Clostridium perfringens ATCC 13124  Bacteria  normal  0.906774  n/a   
 
 
-
 
NC_008262  CPR_1574  major facilitator transporter  100 
 
 
565 aa  1117    Clostridium perfringens SM101  Bacteria  hitchhiker  0.000345614  n/a   
 
 
-
 
NC_011898  Ccel_2528  drug resistance transporter, EmrB/QacA subfamily  49.48 
 
 
590 aa  552  1e-156  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2800  major facilitator superfamily MFS_1  42.93 
 
 
586 aa  490  1e-137  Eggerthella lenta DSM 2243  Bacteria  normal  0.0579957  hitchhiker  0.00000851422 
 
 
-
 
NC_013170  Ccur_13540  arabinose efflux permease family protein  36.88 
 
 
463 aa  318  2e-85  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_23950  arabinose efflux permease family protein  38.21 
 
 
456 aa  297  3e-79  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.297919  normal 
 
 
-
 
NC_009523  RoseRS_1778  major facilitator transporter  32.13 
 
 
474 aa  222  9.999999999999999e-57  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.0000929318  normal  0.0431251 
 
 
-
 
NC_011831  Cagg_0420  major facilitator superfamily MFS_1  29.61 
 
 
460 aa  187  4e-46  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2058  major facilitator transporter  32.3 
 
 
471 aa  184  3e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.469976  normal  0.844529 
 
 
-
 
NC_011725  BCB4264_A3171  Mdr  30.19 
 
 
507 aa  182  2e-44  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3186  drug transport protein, putative  30.41 
 
 
507 aa  179  1e-43  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4540  EmrB/QacA family drug resistance transporter  29.74 
 
 
480 aa  178  2e-43  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4605  EmrB/QacA family drug resistance transporter  28.48 
 
 
478 aa  171  3e-41  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.00000135395  n/a   
 
 
-
 
NC_007530  GBAA_4961  EmrB/QacA family drug resistance transporter  28.48 
 
 
478 aa  171  3e-41  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0262919  n/a   
 
 
-
 
NC_003909  BCE_4851  EmrB/QacA family drug resistance transporter  28.28 
 
 
478 aa  171  4e-41  Bacillus cereus ATCC 10987  Bacteria  normal  0.16573  n/a   
 
 
-
 
NC_005957  BT9727_4441  multidrug resistance protein B  28.48 
 
 
478 aa  171  4e-41  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00000000000526976  n/a   
 
 
-
 
NC_006274  BCZK4459  multidrug resistance protein B  28.28 
 
 
478 aa  170  8e-41  Bacillus cereus E33L  Bacteria  normal  0.0324211  n/a   
 
 
-
 
NC_011725  BCB4264_A4821  drug resistance transporter, EmrB/QacA family  28.48 
 
 
479 aa  169  1e-40  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0415  drug resistance transporter, EmrB/QacA family  28.48 
 
 
479 aa  169  1e-40  Bacillus cereus G9842  Bacteria  hitchhiker  0.00273768  normal 
 
 
-
 
NC_011773  BCAH820_4827  drug resistance transporter, EmrB/QacA family  28.42 
 
 
469 aa  168  2e-40  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010184  BcerKBAB4_2685  EmrB/QacA family drug resistance transporter  30.81 
 
 
511 aa  167  4e-40  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0846353  n/a   
 
 
-
 
NC_009674  Bcer98_2703  EmrB/QacA family drug resistance transporter  30.99 
 
 
511 aa  167  6.9999999999999995e-40  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.445725  n/a   
 
 
-
 
NC_006274  BCZK2608  multidrug resistance protein B  30.97 
 
 
511 aa  166  8e-40  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000057385  n/a   
 
 
-
 
NC_011831  Cagg_1176  major facilitator superfamily MFS_1  27.8 
 
 
450 aa  166  1.0000000000000001e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0522954 
 
 
-
 
NC_003909  BCE_2916  EmrB/QacA family drug resistance transporter  30.55 
 
 
511 aa  166  2.0000000000000002e-39  Bacillus cereus ATCC 10987  Bacteria  normal  0.0905383  n/a   
 
 
-
 
NC_005945  BAS2683  EmrB/QacA family drug resistance transporter  31.23 
 
 
511 aa  165  2.0000000000000002e-39  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000215764  n/a   
 
 
-
 
NC_005945  BAS3910  EmrB/QacA family drug resistance transporter  29.85 
 
 
513 aa  165  2.0000000000000002e-39  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000020213  n/a   
 
 
-
 
NC_007530  GBAA_2877  EmrB/QacA family drug resistance transporter  31.23 
 
 
511 aa  165  2.0000000000000002e-39  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363154  n/a   
 
 
-
 
NC_007530  GBAA_4216  EmrB/QacA family drug resistance transporter  29.85 
 
 
513 aa  165  2.0000000000000002e-39  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000000209346  n/a   
 
 
-
 
NC_014158  Tpau_0550  tRNA-guanine transglycosylase, various specificities  31.44 
 
 
1062 aa  165  2.0000000000000002e-39  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2880  drug resistance transporter, EmrB/QacA family  31.23 
 
 
511 aa  165  2.0000000000000002e-39  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00104329 
 
 
-
 
NC_005957  BT9727_3742  multidrug-efflux transporter  29.85 
 
 
513 aa  163  7e-39  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00000000000625397  n/a   
 
 
-
 
NC_006274  BCZK3758  multidrug-efflux transporter  29.85 
 
 
513 aa  163  7e-39  Bacillus cereus E33L  Bacteria  decreased coverage  0.000783495  n/a   
 
 
-
 
NC_011773  BCAH820_4018  drug resistance transporter, EmrB/QacA family  29.85 
 
 
513 aa  163  7e-39  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_4051  EmrB/QacA family drug resistance transporter  30.18 
 
 
513 aa  162  1e-38  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000130909  n/a   
 
 
-
 
NC_005957  BT9727_2632  multidrug resistance protein B  30.97 
 
 
511 aa  162  1e-38  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000173688  n/a   
 
 
-
 
NC_011658  BCAH187_A4122  drug resistance transporter, EmrB/QacA family  29.38 
 
 
513 aa  162  1e-38  Bacillus cereus AH187  Bacteria  unclonable  0.0000000107671  n/a   
 
 
-
 
NC_011772  BCG9842_B1134  drug resistance transporter, EmrB/QacA family  30.27 
 
 
513 aa  162  1e-38  Bacillus cereus G9842  Bacteria  decreased coverage  0.000000214385  normal 
 
 
-
 
NC_011725  BCB4264_A4105  drug resistance transporter, EmrB/QacA family  30.27 
 
 
513 aa  162  1e-38  Bacillus cereus B4264  Bacteria  decreased coverage  0.00176585  n/a   
 
 
-
 
NC_011658  BCAH187_A2928  drug resistance transporter, EmrB/QacA family  30.85 
 
 
511 aa  161  3e-38  Bacillus cereus AH187  Bacteria  hitchhiker  0.000585053  n/a   
 
 
-
 
NC_011772  BCG9842_B3511  multidrug resistance protein B  29.3 
 
 
582 aa  160  6e-38  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3829  EmrB/QacA family drug resistance transporter  29.48 
 
 
513 aa  160  7e-38  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.000236934  n/a   
 
 
-
 
NC_011725  BCB4264_A2894  drug resistance transporter, EmrB/QacA family  30.59 
 
 
511 aa  160  8e-38  Bacillus cereus B4264  Bacteria  normal  0.0578631  n/a   
 
 
-
 
NC_011772  BCG9842_B2351  drug resistance transporter, EmrB/QacA family  30.33 
 
 
504 aa  159  1e-37  Bacillus cereus G9842  Bacteria  hitchhiker  0.00500074  normal  0.144653 
 
 
-
 
NC_009674  Bcer98_3372  EmrB/QacA family drug resistance transporter  27.68 
 
 
476 aa  159  1e-37  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000356155  n/a   
 
 
-
 
NC_011898  Ccel_2482  drug resistance transporter, EmrB/QacA subfamily  28.19 
 
 
493 aa  158  2e-37  Clostridium cellulolyticum H10  Bacteria  normal  0.15461  n/a   
 
 
-
 
NC_014212  Mesil_0740  drug resistance transporter, EmrB/QacA subfamily  27.4 
 
 
615 aa  157  5.0000000000000005e-37  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.0000446229  decreased coverage  0.00171071 
 
 
-
 
NC_003909  BCE_1911  EmrB/QacA family drug resistance transporter  30.63 
 
 
585 aa  156  9e-37  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3147  drug resistance transporter, EmrB/QacA subfamily  29.03 
 
 
541 aa  155  2e-36  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1947  multidrug ABC transporter, permease  30.61 
 
 
582 aa  155  2e-36  Bacillus cereus AH187  Bacteria  normal  0.128457  n/a   
 
 
-
 
NC_005957  BT9727_1670  multidrug resistance protein B  30.37 
 
 
582 aa  154  2.9999999999999998e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.11549  n/a   
 
 
-
 
NC_006274  BCZK1646  multidrug ABC transporter, permease  30.37 
 
 
582 aa  154  2.9999999999999998e-36  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4845  drug resistance transporter, EmrB/QacA family  27.59 
 
 
431 aa  154  4e-36  Bacillus cereus AH187  Bacteria  hitchhiker  0.000942514  n/a   
 
 
-
 
NC_009972  Haur_2761  EmrB/QacA family drug resistance transporter  30.7 
 
 
545 aa  154  5e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.00000648651  n/a   
 
 
-
 
NC_013517  Sterm_3579  drug resistance transporter, EmrB/QacA subfamily  28.02 
 
 
475 aa  153  5.9999999999999996e-36  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2326  drug resistance transporter, EmrB/QacA subfamily  30.24 
 
 
579 aa  150  4e-35  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.0000000685947  hitchhiker  0.0026086 
 
 
-
 
NC_009253  Dred_0326  EmrB/QacA family drug resistance transporter  28.75 
 
 
539 aa  150  5e-35  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0455  EmrB/QacA family drug resistance transporter  30.38 
 
 
514 aa  150  7e-35  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2785  EmrB/QacA subfamily drug resistance transporter  30.29 
 
 
500 aa  149  1.0000000000000001e-34  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3005  EmrB/QacA family drug resistance transporter  27.11 
 
 
512 aa  148  3e-34  Arthrobacter sp. FB24  Bacteria  normal  0.216237  n/a   
 
 
-
 
NC_013411  GYMC61_3298  drug resistance transporter, EmrB/QacA subfamily  29.37 
 
 
538 aa  147  5e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_0275  drug resistance transporter, EmrB/QacA subfamily  26.96 
 
 
539 aa  147  6e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.269312  normal  0.0148555 
 
 
-
 
NC_003296  RS03124  transmembrane efflux transmembrane protein  28 
 
 
467 aa  146  8.000000000000001e-34  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2221  EmrB/QacA family drug resistance transporter  27.26 
 
 
609 aa  146  9e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.667625  normal  0.81194 
 
 
-
 
NC_009674  Bcer98_0558  EmrB/QacA family drug resistance transporter  28.64 
 
 
538 aa  146  1e-33  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000222683  n/a   
 
 
-
 
NC_008346  Swol_1125  drug resistance transporter, EmrB/QacA family protein  30.18 
 
 
462 aa  145  2e-33  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8279  drug resistance transporter, EmrB/QacA subfamily  30.97 
 
 
680 aa  145  2e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270413  normal 
 
 
-
 
NC_013525  Tter_0751  drug resistance transporter, EmrB/QacA subfamily  29.46 
 
 
491 aa  145  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_0958  drug resistance transporter, EmrB/QacA subfamily  28.65 
 
 
511 aa  145  3e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.026733  n/a   
 
 
-
 
NC_013235  Namu_3817  drug resistance transporter, EmrB/QacA subfamily  29.97 
 
 
697 aa  144  3e-33  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00137036  normal  0.060926 
 
 
-
 
NC_013093  Amir_4864  drug resistance transporter, EmrB/QacA subfamily  29.9 
 
 
685 aa  144  4e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1888  drug resistance transporter, EmrB/QacA subfamily  28.15 
 
 
505 aa  144  4e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  0.170605  n/a   
 
 
-
 
NC_013526  Tter_2612  drug resistance transporter, EmrB/QacA subfamily  29.37 
 
 
565 aa  144  6e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  unclonable  0.000000000331464  n/a   
 
 
-
 
NC_008262  CPR_1253  EmrB/QacA family drug resistance transporter  28.89 
 
 
482 aa  142  9.999999999999999e-33  Clostridium perfringens SM101  Bacteria  normal  0.35553  n/a   
 
 
-
 
NC_011886  Achl_2717  drug resistance transporter, EmrB/QacA subfamily  26.35 
 
 
509 aa  142  9.999999999999999e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00105313 
 
 
-
 
NC_013411  GYMC61_2919  drug resistance transporter, EmrB/QacA subfamily  28.47 
 
 
508 aa  142  9.999999999999999e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008146  Mmcs_2756  EmrB/QacA family drug resistance transporter  27.78 
 
 
682 aa  142  1.9999999999999998e-32  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2800  EmrB/QacA family drug resistance transporter  27.78 
 
 
682 aa  142  1.9999999999999998e-32  Mycobacterium sp. KMS  Bacteria  normal  0.375758  normal  0.713659 
 
 
-
 
NC_011831  Cagg_1102  major facilitator superfamily MFS_1  29.43 
 
 
512 aa  142  1.9999999999999998e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000316091 
 
 
-
 
NC_009077  Mjls_2786  EmrB/QacA family drug resistance transporter  27.78 
 
 
682 aa  142  1.9999999999999998e-32  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4643  putative multidrug resistance protein  25.58 
 
 
537 aa  142  1.9999999999999998e-32  Bacillus cereus G9842  Bacteria  hitchhiker  0.00119486  unclonable  1.5256899999999999e-25 
 
 
-
 
NC_011725  BCB4264_A0695  putative multidrug resistance protein  28.89 
 
 
537 aa  141  3e-32  Bacillus cereus B4264  Bacteria  normal  0.0299481  n/a   
 
 
-
 
NC_013172  Bfae_08840  drug resistance transporter, EmrB/QacA subfamily  27.49 
 
 
592 aa  141  3e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1891  EmrB/QacA family drug resistance transporter  26.42 
 
 
524 aa  141  3e-32  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0457  major facilitator superfamily permease  32.85 
 
 
487 aa  141  3e-32  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000000209922  normal  0.207287 
 
 
-
 
NC_011831  Cagg_0237  drug resistance transporter, EmrB/QacA subfamily  28.75 
 
 
621 aa  141  3.9999999999999997e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_1448  EmrB/QacA family drug resistance transporter  29.09 
 
 
482 aa  140  4.999999999999999e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  0.307254  n/a   
 
 
-
 
NC_013739  Cwoe_4177  drug resistance transporter, EmrB/QacA subfamily  24.73 
 
 
522 aa  140  7e-32  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3042  EmrB/QacA family drug resistance transporter  29.19 
 
 
685 aa  140  7e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.141693  normal 
 
 
-
 
NC_011658  BCAH187_A0792  putative multidrug resistance protein  28.64 
 
 
537 aa  140  7.999999999999999e-32  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000149033  n/a   
 
 
-
 
NC_013947  Snas_2318  drug resistance transporter, EmrB/QacA subfamily  27.05 
 
 
678 aa  140  7.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0731  EmrB/QacA family drug resistance transporter  28.64 
 
 
537 aa  140  8.999999999999999e-32  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3487  drug resistance transporter, EmrB/QacA subfamily  25.7 
 
 
511 aa  140  8.999999999999999e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3948  drug resistance transporter, EmrB/QacA subfamily  29.98 
 
 
524 aa  140  8.999999999999999e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  0.448257  n/a   
 
 
-
 
NC_005945  BAS0630  multidrug-efflux transporter  28.64 
 
 
476 aa  139  1e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.0118993  n/a   
 
 
-
 
NC_005957  BT9727_0574  multidrug resistance protein B; sugar (and other) transporter  28.64 
 
 
537 aa  139  1e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0573  multidrug-efflux transporter  28.64 
 
 
537 aa  139  1e-31  Bacillus cereus E33L  Bacteria  normal  0.0295676  n/a   
 
 
-
 
NC_011773  BCAH820_0720  putative multidrug resistance protein  28.64 
 
 
537 aa  139  1e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  3.55065e-20 
 
 
-
 
NC_008528  OEOE_0759  major facilitator superfamily permease  28.05 
 
 
554 aa  139  1e-31  Oenococcus oeni PSU-1  Bacteria  unclonable  0.0000977825  n/a   
 
 
-
 
NC_012917  PC1_3331  drug resistance transporter, EmrB/QacA subfamily  25 
 
 
511 aa  139  1e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0816524  n/a   
 
 
-
 
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