Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_1888 |
Symbol | |
ID | 8551237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 1977535 |
End bp | 1979052 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003273036 |
Protein GI | 262201828 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.170605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACAC CAACCACGAG CCCGGGCCAG ATCACCGCCC GGCCCTGGGT CGCTCTGCTG GCGCTGTGCG TCGGCTTCTT CATGATCCTC GTCGACATGA CGATCGTCGC GGTGGCCCAG CCGCAGATCC AGGCGGCGCT GGACACCGAC GTCAACGGCA TCGTCTGGGT GACCAGTGCC TACCTGCTCA CCTACGCGGT ACCTCTGCTG ATCACCGGCC GCCTCGGCGA CAAGTTCGGA CCCAAGAACG TCTACCAGCT GGGTCTGCTC GTGTTCACCC TGGCGAGTCT GTGGTGCGGG TTGTCGTCCT CGATCGGTGA GCTCATCGCG GCGCGTGCGC TGCAGGGTGT GGGCGCAGCG CTGATCACCC CGCAGACGAT GGCACTCATC ACCCGCATCT TCCCGCCGGA GAAGCGCGGT GCGGCAATGG GCGTGTGGGG CACCGTCGCC GGTGTCGCCA CCCTCGTCGG CCCGCTGCTC GGTGGCATCC TCACCGACAG CTTCGGCTGG GAGTGGATCT TCTTCGTGAA CATCCCGGTC GGCATCGTCG GTCTGATCCT CGCGGCGATG CTCGTCCCGA GCGTCGAAAC CCACGATCAC CAGTTCGACT GGATCGGTGT GGTGCTCTCG GCCATCGGTT TGTCCGCGCT GGTCTTCGGC ATCCAGGAGG GCGAGACCTA CGACTGGGCA GCCTGGATCT GGGTTCTCAT CGTCGGCGGC GTGCTGACGA TGGCGCTGTT CGTCTACTGG CAGTCGCGGA TCCAGACCGA GCCGCTGGTG CCGCTTTCCC TGTTCCGAGA CCGCAACTTC TCGCTGTCGA ACATCGGCAT CGCTTCGATG GGCTTCGCGA TTTCCGGGTT GATGATCCCG ATGATGTTCT TCCTGCAGCT CGTCGGTGGC ATGTCGCCGA CGCAGTCCGC GGTGATGATG GTGCCGATGG CGGTTCTGAC CGGCGTTCTC GCGCCGATCG TCGGACGCAT CCTCGACCGG GTGCATCCGC GCGCGATCAT CTCCTCCGCA TTGCTGCTCA ACGCGATCGC CGTCTTCCTG CTGGGAATCC TTGCCAAGCC GGCGACTCCG GTGTGGCAGT TCGTCATCCC GCTGTGCCTC ATGGGTGTCG CGTCGGCCGG TATCTGGGCG CCGCTGGCGG CGACCGCGAC GCGCAATCTG CCCTGGCGGC AGGCCGGTGC GGGAGCGGGC GTCTACAACA CGACGCGGAT GATCGGCTCG GTCCTGGGTG CGGCGATGGT GGGTGCGCTG ATGCAGACCC GCCTGGCCGC CGAGCTGCCC GGTGTGGACA CCAACGAGCA CCGCGACACG GTCGCGCAGT TGCCGGCGTT CATCCGCGAG GGATTCGCCG ACGCGATGGG GCAGTCGCTG TTCTTGCCGG CAGCTGCGCT GCTGGTGGGT GTGGCGGCCA CCGTCTTCCT GGTGCGCCCC AAGCATCAGG CATCCGCCAC CGACGATGTT GCGGCCTTCG CCGAGGGTGA GGTCGAGGGC GCGGGCGCGT CGGGCTGA
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Protein sequence | MSTPTTSPGQ ITARPWVALL ALCVGFFMIL VDMTIVAVAQ PQIQAALDTD VNGIVWVTSA YLLTYAVPLL ITGRLGDKFG PKNVYQLGLL VFTLASLWCG LSSSIGELIA ARALQGVGAA LITPQTMALI TRIFPPEKRG AAMGVWGTVA GVATLVGPLL GGILTDSFGW EWIFFVNIPV GIVGLILAAM LVPSVETHDH QFDWIGVVLS AIGLSALVFG IQEGETYDWA AWIWVLIVGG VLTMALFVYW QSRIQTEPLV PLSLFRDRNF SLSNIGIASM GFAISGLMIP MMFFLQLVGG MSPTQSAVMM VPMAVLTGVL APIVGRILDR VHPRAIISSA LLLNAIAVFL LGILAKPATP VWQFVIPLCL MGVASAGIWA PLAATATRNL PWRQAGAGAG VYNTTRMIGS VLGAAMVGAL MQTRLAAELP GVDTNEHRDT VAQLPAFIRE GFADAMGQSL FLPAAALLVG VAATVFLVRP KHQASATDDV AAFAEGEVEG AGASG
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