| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23950 |
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| Symbol | |
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| ID | 8396284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2654440 |
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| End bp | 2655810 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644987142 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003144753 |
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| Protein GI | 257065081 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.297919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACAAC GGAAATTCGG CCGCATAGCT GCGGTCTATC TGGCGGGGCT GCTGATTGGC
GGCTTGTATG TGGGACTTAT CGCCCCGTTG CGCACCGTCA TCCAGGCCGA TTTGGGGTTT
GGCAGCTCGA TGGGCATCTG GATGGTGAAC ATCTACACTC TGTTCTACGC GGCTCTCATC
CCCGTTTCCG GCAAGCTCGC CGACATACAC GGGCGCAAGA AGGTGTTCTC CGTCTGCTTG
CTGGTGTTTG CCGCAGGTGC GCTTTTGTGC GGATTGTCGC AGGTAGCGGG CTCGTTTGTC
CTGCTGCTGG TCGGGCGTGT GATTCAAGCG GCGGGCGCCG GAGGCATCAT TCCTGTTGCA
ACGGCGGAAA TGGGCGTGTC CGCTCCCGAA GAGAAGCGGG GCATGTGGCT CGGCATGGCG
GCGGCGGTTT CGGGCATTTC GAACGTGCTC GGTGCCGCAG TCGGGAGCCT GGTCGTAGCG
GCGGTGGGCT TGGACTCCTG GGGCTGGGCC TTCTTCATGT GCGTGCCGGT GTGCGCGCTG
TTGGAGGCGG GGGCGGTGCT GTGGCTTCCC GACAACGATC GGCAGGTCCG CGGCAGGTTG
GACATCCCCG GTTCGATTCT GCTGGTGGCG TTTCTGGTGC TGCTGCTCCT GGGCTTGACG
GGACTCGACT TTTTTGCACT GAAAGAGAGT CTCGGCCGTC CATCTACCTG GGTGCCCCTG
GCGACCGCCT TGGTGCTGGG CGTCGCGTTC GTTCTGGTTG AGCGCTCGGT TTTCTATCCC
ATGTTCCATC TGGAGTACTT TACGGACAGA AACATCGCGT TGCTCATGGC CGCGTCGTTT
TTCGTGGGGT GCGTCATCAT CAGCATGGTG CTTATTCCCG AATTCGCCGA AGCGGCGCTT
GGCGCCGAGA CGGGTTCGGG TGGCTATTAC ATGGCCATTC TCGGCGTTTT CGCGGTGGTG
GGGCCGCCTA TGGGTGGCAA GATTATCGAC AAGCACGGTG CAAAACCGGT ATTCATCGGC
GGTTCGTTGG TGAGTGCAGC GGGGTACGCG TTCCTGGCGC TGTTCGTGAC GGCGCATCCG
AGCGTTGCGG CTATGGTTTT CGGTCTTGCG CTGGTGGGTC TGGGTATGGG CTTTACCATG
GGTACGCCTT TGAACTACCT CATGTTGCAT GCCGTTCCTG AAGGCGAGAG CTCGTCGGCC
ATCGCCACGA TGAGTCTGAT CCGCCAAATC GGCACCACTG TTGCGCCTGC CGTTTTCGTC
GGGTTCGTTT CCGCAGGTGC AGGGCTGAGC GGCTATGCGG GCATGCTGCT GGCCGTGGCG
GCTTCAGCCT GCATCGCCAT GCTGCTGGTA GCGCTGATCC AAGAAAAATA A
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| Protein sequence | MEQRKFGRIA AVYLAGLLIG GLYVGLIAPL RTVIQADLGF GSSMGIWMVN IYTLFYAALI
PVSGKLADIH GRKKVFSVCL LVFAAGALLC GLSQVAGSFV LLLVGRVIQA AGAGGIIPVA
TAEMGVSAPE EKRGMWLGMA AAVSGISNVL GAAVGSLVVA AVGLDSWGWA FFMCVPVCAL
LEAGAVLWLP DNDRQVRGRL DIPGSILLVA FLVLLLLGLT GLDFFALKES LGRPSTWVPL
ATALVLGVAF VLVERSVFYP MFHLEYFTDR NIALLMAASF FVGCVIISMV LIPEFAEAAL
GAETGSGGYY MAILGVFAVV GPPMGGKIID KHGAKPVFIG GSLVSAAGYA FLALFVTAHP
SVAAMVFGLA LVGLGMGFTM GTPLNYLMLH AVPEGESSSA IATMSLIRQI GTTVAPAVFV
GFVSAGAGLS GYAGMLLAVA ASACIAMLLV ALIQEK
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