Gene Dred_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0326 
Symbol 
ID4957931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp340153 
End bp341772 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content42% 
IMG OID640179491 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001111699 
Protein GI134298203 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAG ATTCCAGAAG AAATATATTA TTAATAGGAC TAATTCTTGG CATGTTTTTT 
TCTGCATTAG ACCAAACCAT TGTTGGAACG GCCATGCCTA GAATTATTGG GGAACTTGGT
GGCTTAGAAA TTTTGACCTG GGTTACCACA GCCTATATGC TATCTTCAAC CACAATTGTT
CCTATTGCGG GAAAACTAGC AGATTTATTT GGTCGCCGCA TCTTATATGT GACCGGTATC
TTTATTTTTA TGCTGGGGTC TGCCCTGTGT GGCACCAGTC AGAATATGAC CGAGTTAATT
ATCTTTCGTG GTTTGCAAGG TCTGGGTGGC GGTATTATGA TGCCAATGGC GATGACAATT
GTAGGGGATA TTTTTCCACC CGAAAAACGT GGTAAATGGC AAGGACTTAT GGGTGCCCTT
TTTGGTTTTT CCTCTATTAT TGGGCCAACA ATAGGTGGCT GGTTTGTGGA TTACGCCTCC
TGGCGATGGG TATTCTATGT AAACCTTCCG GTAGGGATAC TTGCTGCAGT AACGATTTAC
ATCGGGTTGC AGGGAGAGAA GCGCCTCAAG GATAAAGTGG TTATAGACTA TTGGGGTGTG
GCAACACTGG TAATAGGGAT TGTATCTTTA CTACTGGGTT TAAGCTTAGG GGGCAAAGAT
TATCCCTGGA GTTCATGGCA GATTATTGGT TTATTAAGTA CTGCCTTTGT ATTTTTATTT
ACCTTTATAT TTATCGAAAA AAGGGCAGTA GAACCTATTT TAAGTTTAGA CTTGTTTAGT
AATAAGGTTT TTCTAGTGAC AAATATTATA GGATTTTTAA TGGGATTAGG TATGTTTGGT
ACTATGATGT TCTTACCCTT GTTTCTTCAG GGTGTTGTGG GAGTCAGTGC CACCAGTTCA
GGTAATACAA TGATTCCTAT GATGCTGGCT ATGATGATCA CCAGTATGCT TGCTGGTCAG
CTGATTTCTA GAGTTAGTTT CCGTACCCTA TTTGCCACCG GCATGGCTAT TATGACTGTG
GGTTTTTACC TGCTAAGCAC CATGACAGTG CATACCACTC AGTGGGAGGC AATTGCTAAT
ATTATTGTCC TGGGGATAGG AATGGGGCTG GTTATGCCGA TACTAACAAT AGCAGTACAA
CAAGCCTTCC CAGCGGAACA AAGGGGAGTT GCCACTTCTG CCACAACCTT CTTCCGCAGT
ATTGGTGGTA CCCTTGGTAT GACTGTTTTG GGATTGGTGA TGAATCACCA ATCAGTGGAG
TTACTGAAAA AGGACTTCTT TCCTGTAGTT CAAAAGATAC CTGGGCTGCA GTCAGGACCC
TTTAGTGGTA TGCTGACAAA AGCAGAATCT GATCCACAGG GACTATTCAA TGCGCTATTA
AGCCCTGAAA CATTAAGTAA AATACCTGTG CAATTGCAGG AAATTATATT ACCACCCCTT
AAAATAGCAC TTTCAGATTC ACTTCATTTA GTATTCCTGG TGGCTATGGG TATCACCATG
CTTGGAATAA TAGTGAGCTT ATTTATGGGC AATGAGAGGG TTGTAGGAAC AAAGGAGAAG
GTGCTAGATA TCACGGGGGG GCTGAAGAAT GCCAGTGAGT CAGCCTTGCA TGAAACATAG
 
Protein sequence
MNTDSRRNIL LIGLILGMFF SALDQTIVGT AMPRIIGELG GLEILTWVTT AYMLSSTTIV 
PIAGKLADLF GRRILYVTGI FIFMLGSALC GTSQNMTELI IFRGLQGLGG GIMMPMAMTI
VGDIFPPEKR GKWQGLMGAL FGFSSIIGPT IGGWFVDYAS WRWVFYVNLP VGILAAVTIY
IGLQGEKRLK DKVVIDYWGV ATLVIGIVSL LLGLSLGGKD YPWSSWQIIG LLSTAFVFLF
TFIFIEKRAV EPILSLDLFS NKVFLVTNII GFLMGLGMFG TMMFLPLFLQ GVVGVSATSS
GNTMIPMMLA MMITSMLAGQ LISRVSFRTL FATGMAIMTV GFYLLSTMTV HTTQWEAIAN
IIVLGIGMGL VMPILTIAVQ QAFPAEQRGV ATSATTFFRS IGGTLGMTVL GLVMNHQSVE
LLKKDFFPVV QKIPGLQSGP FSGMLTKAES DPQGLFNALL SPETLSKIPV QLQEIILPPL
KIALSDSLHL VFLVAMGITM LGIIVSLFMG NERVVGTKEK VLDITGGLKN ASESALHET