| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4864 |
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| Symbol | |
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| ID | 8329062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5791961 |
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| End bp | 5794018 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644945304 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003102536 |
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| Protein GI | 256378876 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCA CGGAACCCGG ACTCCCCGCC CCCCGCGCCG CGCAGGACGA CGGTCACGCT
GTCGCGCCCA GCCTGTCCCA GGCCCGCACC AACGTCATCT TCGGCGTGAT CGCCCTCGGG
ATGCTCCTCG CCGCCCTGGA CCAGACCATC GTCGCGACCG CGCTGCCCAC CATCGTCGGC
GAGGTCGGCG GCGCCGGGCA CATGAGCTGG GTGGTCACCT CCTACATCCT CGCCGAGACC
GTCGCGTCCG TGCTGGCGGG CAAGTTCGGC GACCTGTTCG GCCGCAAGGC CGTGTTCCAG
GTCAGCGTCG TGGTGTTCAT CGTCGGCTCG TTCTTCTGCG GCGCGGCCGA CACCATGGGC
GGCCTCATCG CGATGCGCGC GCTGCAGGGC ATCGGCGGCG GCGGGATCGC CGTCACCGCC
ACCGCGCTCA TCGCCGACGT CATCCCGCTG CGCGAGCGCG GCAAGTACCA GGGCGCGCTC
GGCGCGGTGT TCGGCGTGAC GACCGTGGTC GGCCCGCTGC TGGGCGGCCT GTTCACCGAC
CACCTGTCGT GGCGCTGGGC GTTCTACGTC AACGTCCCGC TCGCGCTCGC CGTCATCGTG
CTCGCCGCCA GGGCCATCCC CGGCGCGGGC GAGCGCGGCA GGCCCCGGAT CGACTACTGG
GGCGCCGCGC TGATCGCCCT GGGCGCCAGC GGCCTCACGC TCGCCACCAC CTGGGGCGGC
ACCGAGTATC CCTGGGGCTC GGCCACGATC ATCGGCCTGT TCGCCGGTTC CGCCGTCGCG
CTGGCCCTGT TCGTCGTGGT GGAGAACCGC GTCCCCGAGC CGATCCTGCC GATGAGGTTG
TTCCGCGGCA AGGTGTTCGC GGTCGCCTCG CTGCTCAGCT TCATCGTCGG CTTCGCCATG
ATGGGCGCGC TGACGTTCCT GCCCTCGTAC CTCCAGTACG TCAGCGGCGC GTCCGCCACC
TCGTCCGGCC TGCGCACCCT GCCCATGGTG CTCGGCCTGC TGATCACCGC GCTGCTGTCC
GGCCAGGTCG TCGGCGCCAC CGGCCGCTAC CGCCCGTTCC CCATCGCGGG CGCGGCCGTC
ACCGGCGTCG GCATGTACCT GCTGTCCACA CTGGACCCGA GGTCCTCGAT CGCCGCCCAA
TCACTGGCCA TGTTCGTCCT GGGCGCGGGC ATCGGCCTGG TCATGCAGGT GCTCACGATC
GTCGTGCAGA ACACCGCCGA CTACCGCGAC CTCGGCGCCG CCACCTCCGG CGTCACGTTC
TTCCGCTCGC TCGGCAGCTC CTTCGGCGCC TCGATCATGG GCACCGTCTA CGCCAACCGC
CTCGCCGAGA CCCTGCCGCC CGCCCTCGCG CAGACGCGCA CGCCACCGGC CGCGATCACC
ACCCCCGAAG CCCTGCACGC CCTCCCCGAC GCGGCGAGGC AACCGATCAT CACCGCCTAC
GCCGACGCGC TGCACACCGT GTTCCTGGCC GCCGTGCCGA TCGCGCTCCT CGGCCTGCTG
GTGGCGTTCC TGCTGCCCCA GGTCGAGATC CGGGGCACCG CCCGCGAAGC CGCGAAGGGC
GCGGGCGAGG GCTTCGCGAT GCCCACCGAC CAGCACCCCG ACACCCAGCT GGAGAACCTG
ATCGGCCGCG TCGCGGGCCA CAACCCGGAC ATGCCCCGCC AGGTCCTCGC CCGCTCCGGC
CTGCCGCTGG AGCTGCCCGC CGCGTGGGCG CTGCTGGGCA TCCACCTGCG CGCCGAGCTG
CTCGGCGAGC GCACCCGCCA GTCCGACGTC GAGGACCAGG TCGGCCTGCC GCACGGCGTG
CTCACCTCGT TCTACGACGC CCTCGCCGCC GAGGGCCACC TCACCCGCAC CGCCGACGGC
CACCTCGCCC TCACCCCGGC CGCGTCCACG ACCGTGACCG CCCTGATCGA GGCGTGGACG
GCGTGGCTGC TGGACCAGCT CGCCGACTGG ACCGCCCAGC GCGACCCGGA CACCGTCGAC
GGTGAGGTGC GCGCGGCGGT CCGGCGGATC ACCCGCAGGC TCATGCTGGA GCAGCAGCGC
GAGCTCCAGC GCGGCTGA
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| Protein sequence | MSVTEPGLPA PRAAQDDGHA VAPSLSQART NVIFGVIALG MLLAALDQTI VATALPTIVG
EVGGAGHMSW VVTSYILAET VASVLAGKFG DLFGRKAVFQ VSVVVFIVGS FFCGAADTMG
GLIAMRALQG IGGGGIAVTA TALIADVIPL RERGKYQGAL GAVFGVTTVV GPLLGGLFTD
HLSWRWAFYV NVPLALAVIV LAARAIPGAG ERGRPRIDYW GAALIALGAS GLTLATTWGG
TEYPWGSATI IGLFAGSAVA LALFVVVENR VPEPILPMRL FRGKVFAVAS LLSFIVGFAM
MGALTFLPSY LQYVSGASAT SSGLRTLPMV LGLLITALLS GQVVGATGRY RPFPIAGAAV
TGVGMYLLST LDPRSSIAAQ SLAMFVLGAG IGLVMQVLTI VVQNTADYRD LGAATSGVTF
FRSLGSSFGA SIMGTVYANR LAETLPPALA QTRTPPAAIT TPEALHALPD AARQPIITAY
ADALHTVFLA AVPIALLGLL VAFLLPQVEI RGTAREAAKG AGEGFAMPTD QHPDTQLENL
IGRVAGHNPD MPRQVLARSG LPLELPAAWA LLGIHLRAEL LGERTRQSDV EDQVGLPHGV
LTSFYDALAA EGHLTRTADG HLALTPAAST TVTALIEAWT AWLLDQLADW TAQRDPDTVD
GEVRAAVRRI TRRLMLEQQR ELQRG
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