Gene Arth_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagArth_3005 
Symbol 
ID4444372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter sp. FB24 
KingdomBacteria 
Replicon accessionNC_008541 
Strand
Start bp3372868 
End bp3374406 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content65% 
IMG OID639690829 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_832484 
Protein GI116671551 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.216237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACACG TAGCTAGGCC GTGGCCGGCC CTCTGGTCCC TGGTGATCGG TTTCTTTATG 
ATCCTGATCG ACACCACCAT CGTCTCGGTG GCCAACCCCC GGATCATGGA AGGCCTGAAC
GCTGACATCA ATTCCGTCAT CTGGGTGACC AGCGCCTACC TGCTGGCCTA CGCCGTGCCG
CTGCTGATCA CCGGCCGGCT GGGCGACCGG TTCGGGCCCA AGAGGCTTTA CCTCACGGGC
CTGGTGGTGT TCACCCTGGC GTCCCTGTGG TGCGGGTTGT CAGGGGATGT CCAGACCCTC
ATCCTGGCCC GCGTGGTCCA AGGCTTTGGT GCCGCAATTA TGACGCCCCA GACCATGGCG
GTGATCACCC GGATCTTCCC GCCGGACAGG CGCGGCGCTG CCATGGGGAT CTGGGGTGCC
ACAGCGGGTG TCGCCACGCT GGTGGGGCCG ATCCTGGGCG GCGTCCTGGT GGACGGCCTG
GGCTGGGAGT GGATCTTCTT CATCAATGTG CCAGTGGGAA TCGTCGGGTT CATCCTGGCA
CAGCGCTTCG TCCCTACACT GAGCACCCAC CCGCACAAGT TCGACATCCC CGGCGTGCTG
CTCAGCGCCG TCGGGCTCTT CCTGCTGGTG TTCGGCATCC AGGAAGGCGA GACGTACAAC
TGGGGCACCA TCACCGGCCC CGTTACGGTG TGGAGCCTGA TCATCGCCGG GCTTGTGGTC
CTGGTGGGTT TTGTGCTGTG GCAGCGGTTC AACAAGGGCG AGCCGCTTCT CCCGCTTTCA
CTGTTCAAGG ACCGAAACTT CTCGCTGGCC AATATAGGTA TCACCACCGT GGGCTTCACG
GTGACGGCAT TCAGCCTCCC GCTGATCTTC TACTACCAGG TGGTCCGGGG CCTGACACCT
ACGCAGTCGG CCCTGATGAT GGTGCCGATG GCACTGATAT CGGGTGGGCT GGCGCCGGTT
GTCGGACGGA TTATTGACCG GGTCAATCCG AAGTACATCA CCGCGGCCGG CCTGGTCCTG
ATGTCCGTGG CGCTGTTCTG GAATTCTTCC CTGATGCATC CCGACACACC CATCTGGCTG
TTCCTGCTGC CCAGTGCCGT GCTGGGGTTC GCCAACGCGG GCATCTGGGC GCCGCTGAGC
TCCACAGCCA CCCGGAACCT GCCGCCGCGC CAGGCAGGCG CCGGCTCGGG CGTCTACAAC
ACCACCCGAC AGATCGGCGC GGTGCTGGGC AGCGCGGCCA TTGCGGTATT GATCCAGGCG
CGCCTCGCGG CGGAGCTTCC GGCGGCACCG GACGGTTCCG GCGAGGCCAG CCCCATGGCA
TTCGGCGGCA CACTGCCCGA GGCGCTGCAT GAAGGGTTCT CGACGGCGAT GGGCCAGTCC
ATCCTGCTGC CGGCGGCGGT GATCCTGCTT GGCGCGGCCG TGGCGCTGTT CTTCGCCAAA
CCCAAGGCGG TTCAGAACTG GGGTGGGTCC GGTGCCCCCG CGCCGGCGGA AGGCTCAGCG
TCAACCGAAG CCGAATCAGC GCAGACCAAG TCCGCCTAA
 
Protein sequence
MEHVARPWPA LWSLVIGFFM ILIDTTIVSV ANPRIMEGLN ADINSVIWVT SAYLLAYAVP 
LLITGRLGDR FGPKRLYLTG LVVFTLASLW CGLSGDVQTL ILARVVQGFG AAIMTPQTMA
VITRIFPPDR RGAAMGIWGA TAGVATLVGP ILGGVLVDGL GWEWIFFINV PVGIVGFILA
QRFVPTLSTH PHKFDIPGVL LSAVGLFLLV FGIQEGETYN WGTITGPVTV WSLIIAGLVV
LVGFVLWQRF NKGEPLLPLS LFKDRNFSLA NIGITTVGFT VTAFSLPLIF YYQVVRGLTP
TQSALMMVPM ALISGGLAPV VGRIIDRVNP KYITAAGLVL MSVALFWNSS LMHPDTPIWL
FLLPSAVLGF ANAGIWAPLS STATRNLPPR QAGAGSGVYN TTRQIGAVLG SAAIAVLIQA
RLAAELPAAP DGSGEASPMA FGGTLPEALH EGFSTAMGQS ILLPAAVILL GAAVALFFAK
PKAVQNWGGS GAPAPAEGSA STEAESAQTK SA