| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2528 |
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| Symbol | |
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| ID | 7311187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 3051474 |
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| End bp | 3053246 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643609457 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002506836 |
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| Protein GI | 220929927 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTA AGAACGACAA TAAAAAAAGA ATTATTGTAC TGTTAATTTT CCTGTTGGGT
ATTTTTATGG GAGCTATTGA CAGCGGTATT GTATCCCCGG CAAGAACTGT AATTAAAAAC
AGCTTTGGAA TCAGTGAATC CCTAAGTGTA TGGATGGTTA CCATTTACAC CTTGGCATAT
GCAGTAGCTA TGCCTATAGT GAGTAAGCTT TCAGACAGGT ACGGGCGTAA AAAGATCTAT
CTGACCAGCA TAATTGTTTT TGCGGTTGGT TCTTTTCTAT GCGGCTTATC AAATTTTTAT
GGGAATTACA CGTTTTTCCT TATAGCAAGG GTTATTCAGG CTATCGGCGG AGGCGGAATT
ATGCCTATAG CAAACGCTTT TATTGGGAAC AGCTTTCCCC CTGAAAAAAG AGGAACTGCA
CTGGGTTTTG TAGGAGGAGT CTATGGTATT GCCACAATTC TAGGCCCTAC CATGGGTTCA
TCAATTCTGG ATATTGCAGG GGTTGACAAT TGGGGATGGA TATTTTTTAT AAACCTTCCT
ATAAGCTTAT TGATTTTAGT ATTAAGTTAT AATCTTAAAG AGAATCTTGG CGATAATAAC
AATAAAATGG ATTTAAAGGG CAGTCTAGTG CTGAGTATTA TGATTTTAAG CCTTATGTAT
GCCCTTACAA ACTTGAATTA CTTCAATTTT ACTGAAAGTA TAAAGGATTT GAATGTTTAT
CCTTTCCTGA TTCTATTTGT TATCTGTTTA CCTTTGTTTA TTCTTATAGA ATCAAAAGCG
GATGATCCTA TTTTAAATCT GAGATATTTT AAAGAGCGTC AGATACTTTT AACTCTTATT
CTTGGATTTA TTACAGGTGT TGGTCTTATG GCAGTTGTTT TTATCCCTCA GTTCGCTGAA
AACATTCTAA AAATTAAGAC CGGTAACGGA GGATATCTGG TTACATTGAT GTCGGTTTTC
GCAGGAATAA GTGCACCCCT TGGAGGGAAA TTTATTGATA AATACTCTGC AAAACTAGTA
ACAGTTCTGG GTATGATTTG CACAGCTTTT GGAGCTTTTT TCCTAGCATT TTTTACAACT
GCTTACCCGA GTTTTGTTTC AATAATGGTA GGACTGATTT TTGTCGGTTT TGGTATGGGC
TTTACCATGG GTACTCCCCT TAATTACCTT ATGCTGTCAT TTGTCGGTGA AAGTGAATCA
GCTTCCGCTT TATCTACCTT GTCTTTGATA AGGTCAATCG GAGTAGCTAT TTCTCCAAAT
ATAATGATTA ACTTTATAGC TGAAGCCGGC AAGGGTGTTC AAGGTAAAGT AATGGCTGTA
ATGCCAGAGC CTTCCGCCCC TACGTTCCCC GGTTCCCAGT ATATGTCCGA GTACTTTGAT
ATGTCCAAGA TGACAAGTGG AGGCGGAGTT TCAAATACTG CAATAGAAAA GCTTAAAACA
GCTGATGTTA CTAATGTTGT AGATGTTTTG AAAGATTTCT CTTCAAATAT GCTTGATAAA
TTGATACCGA CAATCAAGGA TAAAATACTT GAGGCTATGT CAGCTGCACC AAAAGGTGCC
GCTTCACAAA TCAATCTGGA CAAAATTTTC AACGATTGGA AGCTGGATTA TATTAATAAG
ATTGAAAGTG CAAGGGCAAC TATTGAAAAC ACATTTCAGA CTGCAATAAG CACAGGCTAC
AGAAATATGT TTATAACTGC AGGTGTTATT GCTGTTATAG GACTTATTGC AGCCCTGTTA
CTCAAGAATA AAAAGAAATC GATATCTGAA TAA
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| Protein sequence | MNTKNDNKKR IIVLLIFLLG IFMGAIDSGI VSPARTVIKN SFGISESLSV WMVTIYTLAY
AVAMPIVSKL SDRYGRKKIY LTSIIVFAVG SFLCGLSNFY GNYTFFLIAR VIQAIGGGGI
MPIANAFIGN SFPPEKRGTA LGFVGGVYGI ATILGPTMGS SILDIAGVDN WGWIFFINLP
ISLLILVLSY NLKENLGDNN NKMDLKGSLV LSIMILSLMY ALTNLNYFNF TESIKDLNVY
PFLILFVICL PLFILIESKA DDPILNLRYF KERQILLTLI LGFITGVGLM AVVFIPQFAE
NILKIKTGNG GYLVTLMSVF AGISAPLGGK FIDKYSAKLV TVLGMICTAF GAFFLAFFTT
AYPSFVSIMV GLIFVGFGMG FTMGTPLNYL MLSFVGESES ASALSTLSLI RSIGVAISPN
IMINFIAEAG KGVQGKVMAV MPEPSAPTFP GSQYMSEYFD MSKMTSGGGV SNTAIEKLKT
ADVTNVVDVL KDFSSNMLDK LIPTIKDKIL EAMSAAPKGA ASQINLDKIF NDWKLDYINK
IESARATIEN TFQTAISTGY RNMFITAGVI AVIGLIAALL LKNKKKSISE
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