| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3817 |
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| Symbol | |
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| ID | 8449436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 4191663 |
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| End bp | 4193756 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645042867 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003203103 |
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| Protein GI | 258653947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00137036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.060926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA CCGTTGCCAC CGGCCCCGGC ACCCGGGCGC GGCCGCCCAT GGGGCGCACG
CAGATGAACC TGGTGTTCGT CACCGTCATG CTGGGCATGC TGCTCTCGGC CCTGGACCAG
ACCATCGTCT CGACCGCCCT GCCGACCATC GTCGGCGATC TCGGCGGAGC CGGGCACATG
AGCTGGGTGG TCACGTCGTA CCTGTTGGCC GAGACCATTT CCACGGTGCT GGCCGGCCGG
TTCGGCGACA TGTTCGGGCG CAAGATCGTC TTCCAGATCA GCGTGGCCGT GTTCATCATC
GGCTCCTTCT TCTGCGGCCT GGCCCAGAAC ATGGAGATGC TGATCGCCAG TCGCGCCATT
CAGGGGCTGG GCGGCGGCGG GCTGGCGGTG ACCGCGACCG CGCTGATCGG CGAGGTCATC
CCGCTGCGGG AGCGGGGCAA GTACCAGGGC GCGCTGGGCG CCGTGTTCGG CGTGACCACG
GTGATCGGCC CGTTGCTGGG CGGGTTGTTC ACCGACCACC TGTCCTGGCG GTGGGCGTTC
TACGTCAACG TGCCGATCGC CCTGATCGTC ATCGCGATGG CCGCCACCAC CATCCCCCGG
CTCAGCGAGC GCAGCAAGGT GCCGGTCGAC TACCTGGGGG TGCTGTTCAT CGGCCTGGGC
GCGACCGGCC TGACCCTGGC CACCACCTGG GGCGGCAACG AGTACGCCTG GGGATCACCG
ACCATCATCG GGCTGTTCGT CGGGTCGGTG GTCGCCCTGG CCATCTTCGT CTTCGTGGAA
AGCCGGGCGG TGGCACCGAT TCTGCCGCTG CACCTGTTCC GCAGCCGGGT CTTCACCGTC
TCCTCGATCC TGAGCTTCAT CGTCGGCTTC GCGATGATGG GCTCGATCAC CTACCTGCCC
GCGTTCCTGC AGTTCGTCGG CGGGGCATCG GCCACCGAGT CCGGGCTGCG CATGCTGCCG
ATGGTCGTCG GCCTGCTGAT CACTGCGATC GCCTCGGGCA ACTTCGTCAG CCGCACCGGC
CGGTATCGGA TGTTCCCCAT CGCCGGGGCG GTGGTCACCG GCCTGGGCCT GTACCTGTTC
TCGACCATGG GCGTGGGCAC CTCGTACTGG CTCGAGGCGC TGTTCATGCT CGTGCTGGGC
GCCGGGATCG GCCTGATGAT GCAGATTCTC ACGCTGATCG TGCAGAACAC CGTCTCCTTC
GAGGACCTTG GTTCGGCCAC GTCGGGGGTG TCGTTCTTCC GCACCCTGGG CGGCTCGTTC
GGGGCGTCGA TCTTCGGCAC CATCTACGCC AATGCGCTGG ACGACCACTT GCCGCAGGCG
GTGCTGGCCG CCGGCCTGCT CGACCCCCGC GCGGCCACCG ACCCGGCGGC CCTGCAGGCG
CTGCCGGCCG CTCAGCAGGC ACCGATCGTG GCCGCCTACG CCGACTCGTT CCAGTTGGTC
TTCCTGGGGG CGGTGCCGTT CGCGGTGGTC GCGCTGGTGG TCGCCCTGCT AATGCCGCAG
GTGACGATGC GCGGCATCGC CAAGGACCTG GACTCCGGAC CGGGCGCCGG CTTCGCGATG
CCGCACCCCA CCGGTTCCAC CGACCAGCTC GAGGATCTGG TGGCCGGGGC GCTGCGCCGC
AGCGGGCCGG ACGTCGGCGA CCGCGTCCTG CAGTCCGCCG GCACGGGCCT GTCGACGGCG
CAGATCTGGG GCCTGTCGCA GGTGCTGATC CGGGAATGGT TCTTCGACCA GAAGTCGGTC
ACCCAGTCCA CCATCGAGGA CTGGGTCGGC GTGCCGGAGG GGGTGCTGAC CAGCTTCTAC
GACGAGCTGG TCGCCGACGG GCTGCTCGTC CGCGACGGCG ACCGGCTGGA CCTGGCCCCG
CGCGGCGAGC AGGCCGGCCA GGCGATCGCC CTGGCCTGGC GGGACTACCT GCGCGAGCAG
CTGCGCGACT GGCTGCCGGC CGACAAGGTC GAATCGGCCG AGACCGACGC GGCCATGGTG
CGGGTGGTCA CCCGGCTGAT CCGCGAGTCG GCCTCGCCGG GCCGGCACGC CCTCGAATCC
ACCCAGGGTG ACCAGGCCGC GCCGGCCCAC GCCGTGACCG ACGACCGGGT TTGA
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| Protein sequence | MTQTVATGPG TRARPPMGRT QMNLVFVTVM LGMLLSALDQ TIVSTALPTI VGDLGGAGHM
SWVVTSYLLA ETISTVLAGR FGDMFGRKIV FQISVAVFII GSFFCGLAQN MEMLIASRAI
QGLGGGGLAV TATALIGEVI PLRERGKYQG ALGAVFGVTT VIGPLLGGLF TDHLSWRWAF
YVNVPIALIV IAMAATTIPR LSERSKVPVD YLGVLFIGLG ATGLTLATTW GGNEYAWGSP
TIIGLFVGSV VALAIFVFVE SRAVAPILPL HLFRSRVFTV SSILSFIVGF AMMGSITYLP
AFLQFVGGAS ATESGLRMLP MVVGLLITAI ASGNFVSRTG RYRMFPIAGA VVTGLGLYLF
STMGVGTSYW LEALFMLVLG AGIGLMMQIL TLIVQNTVSF EDLGSATSGV SFFRTLGGSF
GASIFGTIYA NALDDHLPQA VLAAGLLDPR AATDPAALQA LPAAQQAPIV AAYADSFQLV
FLGAVPFAVV ALVVALLMPQ VTMRGIAKDL DSGPGAGFAM PHPTGSTDQL EDLVAGALRR
SGPDVGDRVL QSAGTGLSTA QIWGLSQVLI REWFFDQKSV TQSTIEDWVG VPEGVLTSFY
DELVADGLLV RDGDRLDLAP RGEQAGQAIA LAWRDYLREQ LRDWLPADKV ESAETDAAMV
RVVTRLIRES ASPGRHALES TQGDQAAPAH AVTDDRV
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