Gene Ccel_2482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2482 
Symbol 
ID7311147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3001413 
End bp3002894 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content38% 
IMG OID643609411 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_002506790 
Protein GI220929881 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.15461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA CAGAGAAGCA GTATAAGAAC AAGGGATTAA TCCTGTTAAA CATAGTATTA 
TTAACTTTTA TGTCGTGTCT TGACAGTAGT ATTGTAAATG TTGCACTGCC CGTTATGGCG
AATGAATTTT CAGTGGGAAT GGGTTCAATT TCAACAATAG TATCAACTTA CCTGATTGCT
ATTTCGGCGA CTGTATTAAT ATTCGGAAGA CTGGGTGACA TTAAGGGAAA AGTAAAAATC
TTTAAAACAG GTATTGTCGT ATTTACTTTC GGTTCATTAC TATGTGCTGT TTCACGCACA
TTAAATATAC TGGTAATTTC CAGAATAATC CAGGCAATAG GTGCTGCATC ATTTATGGCG
ACAAACCAGG GAATAATTAC AAGGACGTTC CCGGCAAATG AAAGAGGTAG AGCACTGGGT
ATTACAGGTT CCTTTGTGGC ACTTGGTACT CTTGCGGGAC CTCCGCTGGG TGGATTTATT
GTGGATGTAG CAAGCTGGGA ATACATATTC CTGATAAACA TACCAATTGG TATTTTCGCA
TTCATAATGG GAATAAAAGT ACTCCCTAAA GATGAGGAGG TTACCGACAC AAAATTTGAC
ATAAAAGGTG CAATTCTTTT TCTAATTAGT ATAATATCTC TCTTTTCAGC GTTGTTGGCA
GGCGAACAGA TAGGGTTCCT CAAGCCGGTT ATCCTGCTAA GCTTTGGGGT GGCTGCTATA
TCATTTATTT TATTTATAAG AATAGAAGGT AGGGTTGAAA GTCCTCTTCT CCAGCTTAGC
ATTTTCAGAA ATAAGCTGTT TTCGCTGAGT ATTTTCTGCG GATTTCTCCT TTTTGTGTGT
ATGAGCTGTT CAAACATTAT ATTGCCCTTC TATTTTCAGG ACATTATAAA AATGACACCC
TGGTTAACGG GAATATACCT CATTTCTTAT CCCCTAATAC TTTTAGTGGT ATCTCCGGTC
AGCGGATATC TGTCAGATAA AACCGGTTCG GAGACGCTTA CCTTTGTGGG TTTATCTATT
TTTAGTATAG GTTGTTTTTT AATGGCTACT ATCAACCAGA CATTTAATCC AATAAAAATT
ATATTGTTTA TTTCATTAAT GGCTGTAGGA AACGGTATGT TCCAATCTCC GAATAATGCA
CTTGTTATGT CAACTGTACC GAGGAGCCGT CTAGGTATTG CAGGAAGTAT TAATGCACTT
GTCAGAAATC TTGGCCTTGT TATCGGTGTA TCGGTATCAA CGCTGGTGCT TTACGGGATG
ATGAGTTTCA AGGTGGGCTA TAAGGTAACT AATTTTGTTG AAGGAAAGGA AGCAGAATTT
ATTTTCGGAA TGAGTTCAGC ATATATTTTC ATTGGAGCAC TTTCCTTGAT TGCCGCAATT
CTCACAGCAG TCAGATTATA CAGAACCAAG AAAAATGCTG CTTCCAATGA TAATAACTCT
GATGTTCAGG ATTACGATTT CAGAGATGTT GAAACCAAAT AG
 
Protein sequence
MENTEKQYKN KGLILLNIVL LTFMSCLDSS IVNVALPVMA NEFSVGMGSI STIVSTYLIA 
ISATVLIFGR LGDIKGKVKI FKTGIVVFTF GSLLCAVSRT LNILVISRII QAIGAASFMA
TNQGIITRTF PANERGRALG ITGSFVALGT LAGPPLGGFI VDVASWEYIF LINIPIGIFA
FIMGIKVLPK DEEVTDTKFD IKGAILFLIS IISLFSALLA GEQIGFLKPV ILLSFGVAAI
SFILFIRIEG RVESPLLQLS IFRNKLFSLS IFCGFLLFVC MSCSNIILPF YFQDIIKMTP
WLTGIYLISY PLILLVVSPV SGYLSDKTGS ETLTFVGLSI FSIGCFLMAT INQTFNPIKI
ILFISLMAVG NGMFQSPNNA LVMSTVPRSR LGIAGSINAL VRNLGLVIGV SVSTLVLYGM
MSFKVGYKVT NFVEGKEAEF IFGMSSAYIF IGALSLIAAI LTAVRLYRTK KNAASNDNNS
DVQDYDFRDV ETK