Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2482 |
Symbol | |
ID | 7311147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3001413 |
End bp | 3002894 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643609411 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002506790 |
Protein GI | 220929881 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.15461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA CAGAGAAGCA GTATAAGAAC AAGGGATTAA TCCTGTTAAA CATAGTATTA TTAACTTTTA TGTCGTGTCT TGACAGTAGT ATTGTAAATG TTGCACTGCC CGTTATGGCG AATGAATTTT CAGTGGGAAT GGGTTCAATT TCAACAATAG TATCAACTTA CCTGATTGCT ATTTCGGCGA CTGTATTAAT ATTCGGAAGA CTGGGTGACA TTAAGGGAAA AGTAAAAATC TTTAAAACAG GTATTGTCGT ATTTACTTTC GGTTCATTAC TATGTGCTGT TTCACGCACA TTAAATATAC TGGTAATTTC CAGAATAATC CAGGCAATAG GTGCTGCATC ATTTATGGCG ACAAACCAGG GAATAATTAC AAGGACGTTC CCGGCAAATG AAAGAGGTAG AGCACTGGGT ATTACAGGTT CCTTTGTGGC ACTTGGTACT CTTGCGGGAC CTCCGCTGGG TGGATTTATT GTGGATGTAG CAAGCTGGGA ATACATATTC CTGATAAACA TACCAATTGG TATTTTCGCA TTCATAATGG GAATAAAAGT ACTCCCTAAA GATGAGGAGG TTACCGACAC AAAATTTGAC ATAAAAGGTG CAATTCTTTT TCTAATTAGT ATAATATCTC TCTTTTCAGC GTTGTTGGCA GGCGAACAGA TAGGGTTCCT CAAGCCGGTT ATCCTGCTAA GCTTTGGGGT GGCTGCTATA TCATTTATTT TATTTATAAG AATAGAAGGT AGGGTTGAAA GTCCTCTTCT CCAGCTTAGC ATTTTCAGAA ATAAGCTGTT TTCGCTGAGT ATTTTCTGCG GATTTCTCCT TTTTGTGTGT ATGAGCTGTT CAAACATTAT ATTGCCCTTC TATTTTCAGG ACATTATAAA AATGACACCC TGGTTAACGG GAATATACCT CATTTCTTAT CCCCTAATAC TTTTAGTGGT ATCTCCGGTC AGCGGATATC TGTCAGATAA AACCGGTTCG GAGACGCTTA CCTTTGTGGG TTTATCTATT TTTAGTATAG GTTGTTTTTT AATGGCTACT ATCAACCAGA CATTTAATCC AATAAAAATT ATATTGTTTA TTTCATTAAT GGCTGTAGGA AACGGTATGT TCCAATCTCC GAATAATGCA CTTGTTATGT CAACTGTACC GAGGAGCCGT CTAGGTATTG CAGGAAGTAT TAATGCACTT GTCAGAAATC TTGGCCTTGT TATCGGTGTA TCGGTATCAA CGCTGGTGCT TTACGGGATG ATGAGTTTCA AGGTGGGCTA TAAGGTAACT AATTTTGTTG AAGGAAAGGA AGCAGAATTT ATTTTCGGAA TGAGTTCAGC ATATATTTTC ATTGGAGCAC TTTCCTTGAT TGCCGCAATT CTCACAGCAG TCAGATTATA CAGAACCAAG AAAAATGCTG CTTCCAATGA TAATAACTCT GATGTTCAGG ATTACGATTT CAGAGATGTT GAAACCAAAT AG
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Protein sequence | MENTEKQYKN KGLILLNIVL LTFMSCLDSS IVNVALPVMA NEFSVGMGSI STIVSTYLIA ISATVLIFGR LGDIKGKVKI FKTGIVVFTF GSLLCAVSRT LNILVISRII QAIGAASFMA TNQGIITRTF PANERGRALG ITGSFVALGT LAGPPLGGFI VDVASWEYIF LINIPIGIFA FIMGIKVLPK DEEVTDTKFD IKGAILFLIS IISLFSALLA GEQIGFLKPV ILLSFGVAAI SFILFIRIEG RVESPLLQLS IFRNKLFSLS IFCGFLLFVC MSCSNIILPF YFQDIIKMTP WLTGIYLISY PLILLVVSPV SGYLSDKTGS ETLTFVGLSI FSIGCFLMAT INQTFNPIKI ILFISLMAVG NGMFQSPNNA LVMSTVPRSR LGIAGSINAL VRNLGLVIGV SVSTLVLYGM MSFKVGYKVT NFVEGKEAEF IFGMSSAYIF IGALSLIAAI LTAVRLYRTK KNAASNDNNS DVQDYDFRDV ETK
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