Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1448 |
Symbol | |
ID | 4203690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1631495 |
End bp | 1632943 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082326 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_695891 |
Protein GI | 110799812 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.307254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAATG CTAATGAAAA CTCTAAAAAC ACTGAAGATT TAGTTTATAA AAACAGATGG TTTATATTAG CAGTATTAGT AATGCAACCA TTCATGGCAT GTTTAGACAG TAGCATAGTT AATGTAGCCC TTCCAATTCT TCAAAAAGAA CTTGGTGCAA CTATGGCTGG AACTGAATGG ATTGTAAGTT CATATTTAAT AATAATTTCT GCATCAATTT TAATCTTTGG TAGATTAGGA GATATGCATT CAAAAAGTTC AGTATTTATA AAAGGGATTT TAATATTTGT TCTTGGATCT TTCCTTTGCG GAATATCCCC ATCACTTCCT ATTCTAGTAT TATCTAGAGT TGTGCAAGCT ATTGGTGCCG CTATGTTAAT GTCCACTAAC CAAGGTATTA TAACAGATGT TTTCCCTCCT AAGGAAAGAG GAAAAGCTTT AGGTATCTCT GGTTCCTTTG TTGCCTTAGG TTCTATATTA GGTCCAGCAT TAGGTGGATT CATAGTTACA TATTTCACTT GGCACTATAT TTTCTTAATA AATGTACCTA TAGGTATAAT TTGCTACATA TTCGCTAAAA AATATCTACC AATAAGAATT CCTAAGGAAT CTGAGTCAAT GGATAAGCCT GGAGCAACAA TGTTTTTCAT TGCTACAATT CTTATATTTA CATCAATATT AATTAGCCAA CATTTAGGCT TTACTAGCAT ATATGTAATC CTAGGATTAA TAATTGGACT TATTATTCTT GCTTTATTCT TAATCTATGA AAACAAGATA AAGAATCCTA TGCTTCATTT AAGCTTATTT AAAAAGCCAA TATTCTCAGT AAGCTTAATA TGTGCATTTA TTTCCTTTAC TGCAATAAAT ACAATTAATG TTATTCAACC CTTTTACTTA AATGACATTT TAGGCTATAG TCCTGGAAAA ATTTCAGTTA TAATGACAGC TTATCCAATT GTATTATTTG TTATTGCACC ACTTAGTGGA ACATTATCAG ATAAAATAGG AAGTAAAATA CTTACTTTAA TAGGATTATT CTTAACAGGA GTTTCAATGA TTTTATTATC ATCATTAAAT AGTAACTCAA GTGAAACATC CATATTCCTT ATGTTATCTT TATTAGGTTT TTCAAATGGA TTATTCCAAT CTCCAAATAC AAACCTTATA ATGTCCTCTG TTCCTAAGGA TAAGCTTGGA ATAGCAGGAG GTACTAATGC CTTAATAAGG AATTTAGGTC TTGCCTTTGG AGTATCAGCT TCAACCTCTA TTTTATATGC AAAAATGAGT AAGTTAGCTG GATTTAGAGT TTTAGGATCT GTTCCTAATA GACCTGATAT ATTTATTTCT GGAATGAGAT TTGTATATAT TTTAGTTGCT ATTTCATGTT TTATATGCCT TATAATTTCT ATAGCTGAAT ATATTCAATC TAAAAAAAAT AACAAATAA
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Protein sequence | MNNANENSKN TEDLVYKNRW FILAVLVMQP FMACLDSSIV NVALPILQKE LGATMAGTEW IVSSYLIIIS ASILIFGRLG DMHSKSSVFI KGILIFVLGS FLCGISPSLP ILVLSRVVQA IGAAMLMSTN QGIITDVFPP KERGKALGIS GSFVALGSIL GPALGGFIVT YFTWHYIFLI NVPIGIICYI FAKKYLPIRI PKESESMDKP GATMFFIATI LIFTSILISQ HLGFTSIYVI LGLIIGLIIL ALFLIYENKI KNPMLHLSLF KKPIFSVSLI CAFISFTAIN TINVIQPFYL NDILGYSPGK ISVIMTAYPI VLFVIAPLSG TLSDKIGSKI LTLIGLFLTG VSMILLSSLN SNSSETSIFL MLSLLGFSNG LFQSPNTNLI MSSVPKDKLG IAGGTNALIR NLGLAFGVSA STSILYAKMS KLAGFRVLGS VPNRPDIFIS GMRFVYILVA ISCFICLIIS IAEYIQSKKN NK
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