Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1102 |
Symbol | |
ID | 7268555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1359320 |
End bp | 1360858 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643565944 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002462448 |
Protein GI | 219848015 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000316091 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGAAGAATC CAGCTTTGAC CAACGTTGAA ACCCGTACCG TTGACCCGCG CTTGACACTG GCGCTGGTCT GTCTCGCGAT CTTTATCGGT GCGGTCGATC TCACCGTGAT CAGTGCAGCG TTGCCCAAAG TGATGATCGA CCTCCGCCTC GCTCTTGATA CCGAGCTGAA CCGTGCGTCG TGGGCGGTGA GTGGGTACTT GTTGGCGTAT ACCGTCAGTA TTACCTTCAT GGGGCGGTTG TCCGACCTAT TCGGACGGCG GAAGGTCTAT TTTCTCTGCC TCATTACCTT CTTGGTTGGA TCGGCGGTCG TGGCGGCGGC GCCCAACTTG ACGATATTGA TTGTTGGCCG GGTTATCCAG GCGCTTGGAG CCGGAGCGAT GGTACCGGTA TCGATGGCAC TGGTCGGCGA TCTCTTTTCG GTAGGGCAGC GGGCGGCTGC CCTCGGTGTG ATCGGGGCCG TCGATACTGC CGGCTGGATG GTTGGTCATC TCTACGGCGG CGTCTTGATG CGTCTGTTCG ACGACTGGCG GCTGCTCTTT TGGCTCAATC TCCCGATCGG TGCGGTGGCG CTTGGGCTGA CGTGGTACGC CCTGCGAAAT GTACCAACCC CGCCGCGCGT AGGTTCGTTC GATTGGCCGG GAACCGTGTT GTTGAGTGCC GGTCTGGTGG TATTGAACGT TGGTTTGGCG GCCGGGAGTG AGTTGGGGGC GACCGACTTC TACGGTGAGC GGTTGGGGCC TCCACCGTAT GCCGGGCCGC TGGTCGGATT AGCGTTGATG TTGTTCGCAC TGTTTGTCTG GGTCGAGCGA CGCAGCGCCG ATCCGTTGAT CGGCTTAGAA CTGTTTACGC GCCGTGATAC GGCGATGGCG TGTATCATCA ATGTGATGGT TGGTTTTGGC TTGGCCATCG CGATCACGAA TGTACCACTG TACATTAACA CTCGTCTGCT GCTTTACCAC CCAACCGATA GCGATATTCT GCGGATTGCA GCGTGGGATG CCGGTTGGAT GTTGTCGGCA TTGACCTTGA CGATGGCTGT CGCCGCATTG CCCGGTGGCC TATTGACGGC ACGCTTTGGG GCGCGCTTGC CGACCATCCT CGGCTTAGGC TTAGCGCTCG TTGGCTATCT CTTGATGACG TTCTGGGGGC CAGAGGCAAC CTATCTGCGG ATGGGGTTGG AATTGGCCCT AACCGGTATT GGTCTCGGCT TGGTGATCGC ACCGGTCGCC GATACCGTTG TAGCGGCTGC CGGCGGAGAC CAGCGTGGGG CAGCTTCGGC ATTGGTGATT GCTCTGCGTT TGGTTGGGAT GACGGTCGGT GTCGCGTTGC TCACATTGTG GGGCGTGCAT CGGCAAGATG TGTTACGGCG GGCCGGCGCC GATAACCCGC TGGCAATGAC CGACCCCGCC CGGTTTCTGA TGGAGATTGC CGCCAACGTG ATCGGCGAAA CCTTTCTCTT TGGCGCCGCA GCGTGTGTCA TCGGACTGGT GGCCGGTTGG TTAATGCGAA GATGGGTGGT AACACATCAC ACCGGATAA
|
Protein sequence | MKNPALTNVE TRTVDPRLTL ALVCLAIFIG AVDLTVISAA LPKVMIDLRL ALDTELNRAS WAVSGYLLAY TVSITFMGRL SDLFGRRKVY FLCLITFLVG SAVVAAAPNL TILIVGRVIQ ALGAGAMVPV SMALVGDLFS VGQRAAALGV IGAVDTAGWM VGHLYGGVLM RLFDDWRLLF WLNLPIGAVA LGLTWYALRN VPTPPRVGSF DWPGTVLLSA GLVVLNVGLA AGSELGATDF YGERLGPPPY AGPLVGLALM LFALFVWVER RSADPLIGLE LFTRRDTAMA CIINVMVGFG LAIAITNVPL YINTRLLLYH PTDSDILRIA AWDAGWMLSA LTLTMAVAAL PGGLLTARFG ARLPTILGLG LALVGYLLMT FWGPEATYLR MGLELALTGI GLGLVIAPVA DTVVAAAGGD QRGAASALVI ALRLVGMTVG VALLTLWGVH RQDVLRRAGA DNPLAMTDPA RFLMEIAANV IGETFLFGAA ACVIGLVAGW LMRRWVVTHH TG
|
| |