| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8279 |
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| Symbol | |
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| ID | 8339658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9588777 |
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| End bp | 9590819 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644961365 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003118943 |
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| Protein GI | 256397379 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.270413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCAG AGTCGACAGG CGCCGGAGCG GACGAGAAGA ACGAAGTCCC GCTGGTCTTC
GCCGGCGTCA TGCTGGGCAT GCTGCTGGCC GCGCTGGACC AGACCATCGT CTCCACGGCG
CTGCCGACCA TCGTCTCCGA CCTCGGCGGC GCCAACCACA TCTCGTGGGT GGTGACCTCC
TACCTGCTGG CGTCCACGGC GCTGACGCCG CTGTGGGGCA AGCTCGGCGA CCAGTTCGGG
CGCAAGCGGA TCTTCCAGAC CGCGATCGTC GTCTTCCTGA TCGGCTCGGC GCTGTGCGGG
CTGTCGCAGA ACATGACCCA GCTGATCGCC TCCCGCGCGC TGCAGGGCGT CGGCGGCGGC
GGGCTGATGG TGCTGGCGAT GGCGCTGATC GCTGACGTCG TCCCGCCCCG CGACCGCGGC
AAGTACCAGG GCGTGGTCGG CGCGGTGTTC GGCGTGGCGA GCGTGATCGG CCCGCTGATC
GGCGGCTTCT TCGTGGACAA CCTCAGCTGG CGCTGGGTGT TCTACGTCAA CCTGCCGGTC
GGCGCGATCG CGCTGGTCGT CGTCGCCATC GGCCTGCGCA CCCACACCGC GCACCGCAAG
CCGGTGATCG ACTACCTCGG CACGTTCCTC ATCGCCGCGG CCGCCAGCTC CCTGATCCTG
ATCACCAGCT TCGGCGGCAG CACCTGGGCC TGGAGCTCGT GGCAGGTGTA CCTGTGCGGC
GCGGTGGCGG CGGCGTGCCT GATCGCCTGG TTCTACGCGG AGAAACACGC CAAGGAACCG
GTACTGCCGC TGCACATGTT CAAAAACCCG GTCTTCGCGA TGTGCAGCAC GATCGGGTTC
GTCGTGGGCT TATGCATGTT CGGCAGCCTG ACCTTCCTGC CGCTGTACCA ACAGGTCGTG
CACGGCGCGA CGCCCACCGC CTCCGGTCTC CAGCTGCTGC CGCTGATGGC CGGCCTGCTG
TTCGCCTCGA TCACCTCCGG GCAGCTGATC AGCCGGACCG GCCGCTACAA GATCTTCCCG
ATCGTCGGCA CGGCGGTGAT GACCGTCGGC GCCTGGCTGC TGTCCCGCAT GACCGACACC
ACGTCCACCG CCTCGAACGC GGTCGCGATG CTGGTCTTCG GCCTCGGGCT CGGCCTGGTG
ATGCAGGTGC TGATCATCGC GGTGCAGAAC AACGTGGACT ACGAGGAACT GGGCACGGCG
ACCAGCGCGG TGACGTTCTT CCGCTCCATC GGCGGCGCGT TCGGGGCGTC GCTGTTCGGC
ACCATCTTCA ACAACAAGCT GACATCCGAG ATCAAGACGG CGGTGGCGAA CGGGACGATC
AGCCCGAAGT TCCCGTTCGA GCAGGCGATC GAGAACCCGA CGGTCATCAA GCAGTTCCCC
AAATCGGTGA CGCAGCCCTT CCTGCACACG TACGCACACG CGCTGCACTA CGTCTTCCTC
TACGCGATCC CCCTGTGCAT CCTGGCTTTC CTGCTCGCCC TCTTCCTCCG CGAAGTCCCC
CTGCGCACCA CGACCCGCGG CACCGGAGCC GCCGAGGCGA GCACCGGCCC GACGCAGCGC
TCCTCCATCG ACGAGCTGGA GCGCGCACTC ACCCGCCTGT CCAGCCGCCA GAACGTGAAG
GACCGCTACA CCCAAACGAT CGTCAAATCA GGCATCGACA TCACCGTCCC AGAGGCATAC
GGCCTCTTCC GCCTGAAGCA ATTCGGCCCG ACCCGCATCG ACGACATCCC CACCCGCCTG
AACCTCCCGA TGTCCGAAAT CCGCCCCCAC CTCGACACCC TGGTGGCCAC CGGCCGAGCC
GCCCTCGAAG GCACCCCGCC CCACCAGACC GTGGTGATGA CCGAAGCCGG CGAAGCAGCC
GTCGACGCCC TCTGCGCCGC CCGCCGCGCC ATCCTCGTGG ACCAACTCGA CGGCTGGTCA
CCCGACCAGC ACGCCGAACT CCTCACCATG CTGCGCCAAC TCGCCGACTC CTCCATGGAC
CAGGAGGACC GCCACCTGCT GGCGGACGAC GCGGCGGGGA AGGCTGCTGC GGCGGGGATG
TAG
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| Protein sequence | MSAESTGAGA DEKNEVPLVF AGVMLGMLLA ALDQTIVSTA LPTIVSDLGG ANHISWVVTS
YLLASTALTP LWGKLGDQFG RKRIFQTAIV VFLIGSALCG LSQNMTQLIA SRALQGVGGG
GLMVLAMALI ADVVPPRDRG KYQGVVGAVF GVASVIGPLI GGFFVDNLSW RWVFYVNLPV
GAIALVVVAI GLRTHTAHRK PVIDYLGTFL IAAAASSLIL ITSFGGSTWA WSSWQVYLCG
AVAAACLIAW FYAEKHAKEP VLPLHMFKNP VFAMCSTIGF VVGLCMFGSL TFLPLYQQVV
HGATPTASGL QLLPLMAGLL FASITSGQLI SRTGRYKIFP IVGTAVMTVG AWLLSRMTDT
TSTASNAVAM LVFGLGLGLV MQVLIIAVQN NVDYEELGTA TSAVTFFRSI GGAFGASLFG
TIFNNKLTSE IKTAVANGTI SPKFPFEQAI ENPTVIKQFP KSVTQPFLHT YAHALHYVFL
YAIPLCILAF LLALFLREVP LRTTTRGTGA AEASTGPTQR SSIDELERAL TRLSSRQNVK
DRYTQTIVKS GIDITVPEAY GLFRLKQFGP TRIDDIPTRL NLPMSEIRPH LDTLVATGRA
ALEGTPPHQT VVMTEAGEAA VDALCAARRA ILVDQLDGWS PDQHAELLTM LRQLADSSMD
QEDRHLLADD AAGKAAAAGM
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