| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0237 |
|---|
| Symbol | |
|---|
| ID | 7269151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 296660 |
|---|
| End bp | 298525 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643565106 |
|---|
| Product | drug resistance transporter, EmrB/QacA subfamily |
|---|
| Protein accession | YP_002461621 |
|---|
| Protein GI | 219847188 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCA CAACATCACC GGCTTCCACG ACGGTAACGC GAATCGATTA CGCAGTTACC
CTCGATCAGC GCAGCAAAGT GCTGATCTTA ATCGGAGTCT TGCTCGGTTT GTTTCTCTCG
GCGCTCGATC AGACTATCGT CTCTACCGCT CTACCACGGA TCGTAGCCGA TCTCAAGGGA
ATTGAACTGA TCGGTTGGGT CTCGACCGGC TATCTGTTGG CTTCGACGTC GATGGTGCCG
ATCTACGGCA AACTGTCAGA CATCTACGGA CGTAAATATG TTCTGTTGTT TGGGATCGCG
GTCTTCTTGC TTGGCTCGCT GCTGTGCGGG CTGGCCGGTG ACATGACCCA ACTGGTCTTC
TATCGCGGTC TCCAAGGCTT CGGTGCCGCA GCCCTAACCT CGACCGCGTT CGCCATTCCC
GCCGACCTCT TCGCACCGGC GGAACGGGCG CGCTATATGG GTCTCTTCGG TGCCGTGTTT
GGTCTGTCGA GTGTTGTGGG GCCGTTTATC GGTGGCCTTC TCACCGACAA TCTGAGCTGG
CATTGGGTGT TCTTTGTCAA TTTGCCGTTA GGGGTGGTGG CGCTCGGTTT TATTATCGCC
AAGCTACCGC GCCTACACAG TGGTCTCAAA CCGGCGATTG ACTATGCCGG TGCGGCGACG
TTGTTGTTGA CCGTGATCCC GTTCTTGTTG GCGTTGACCC TCGACAAGAA CGACTTTTCG
TGGACATCAC CGTTCATTAT CAGTCTGTTT GCCGTCAGTG CGATTGGCTT GATCTTCTTC
CTGCTCATCG AGCGGCGGGC CGAATCACCT ATCTTGCCAC TGCATCTGTT CCGCAATCGC
ACCTTTACGC TCACGACCAT CATCGGCTTC ACCGTCGGTG CAACCCTGTT CGCCGCGATC
TTCTTCCTCT CGCTCTATCT GGTCAATGTA CTCGGCGTGA GTGCCACTGC TGCCGGTACG
ACCCTTATCC CGCTCACCCT TAGCCTTGTG GTGGGGGCGA TGGTGTCATC GCAGATCGTG
CAGCGTACCG GGCGCTATAA GTGGGTGATC GTTGGTGGGA TGGCGATAAT TGTCGCTGCG
CTGTGGTGGC TCACCACCCT CACCCCTGAC ACGTCGGTCT GGATGGTACG ACTGCGGATG
ATCGCACTCG GATTGGGGTT AGGCCCCTCG ATGCCGATCC TCAATCTGGC GATGCAGAAC
GCGGTGCCGC GCACCGACAT GGGTGCAGCG ACGGCTAGCC GACAATTCTT CCAGCAGCTC
GGCCAAGTGG TCGGTTCGGC GGTCTTTGGT GCGCTGCTTA CCGGCGTGTT GACAACAACC
CTCACTGCGA ATCTGGCCCC GATTCAGGCC CAGTTGCCGC CGGAAATGGC TGCCCGCTTC
GACAGCAGCA CGTTGCGCAA CGGGATGGGT GCCGGTGAGG GGGCAAGTGG CGAAACGGTT
GATCCGGCCG TGCGGATCGA GCAGGCGATT GCCGATCAGT TTGCGTCGCG CCGTGATTTA
CTGACCCGCG CCTTGCGCGA TGCCGATCCG GCCGCAATTG AGGCATTGCG TGCCGACCCC
CAACTGCCCG ATCAACAGAA GGCGATGCTG GATATGATCG GGAACTTGCC GGCAGCGGCC
CGCGCGCAGG CGCTCGACCG GGTATTGGCC CAACTTGACC GGGCTGAGCA GAAGGCTCGC
GCTGAGGGGC GGGCAATCGG CGAGCAGATT AGCGCAGCGC TCAAAGATGC ATTTACCAAG
AGCGTGACGA CAATCTACTG GTACGCAATC TGGCTGGCGG TGATCGGGTT GGCACTGGCG
CTGTTCATTC CCGAATTGCC CCTTAAGCAG AATTATGGCG AAGATTTACC GCCATTGATG
GAGTAG
|
|---|
| Protein sequence | MTTTTSPAST TVTRIDYAVT LDQRSKVLIL IGVLLGLFLS ALDQTIVSTA LPRIVADLKG
IELIGWVSTG YLLASTSMVP IYGKLSDIYG RKYVLLFGIA VFLLGSLLCG LAGDMTQLVF
YRGLQGFGAA ALTSTAFAIP ADLFAPAERA RYMGLFGAVF GLSSVVGPFI GGLLTDNLSW
HWVFFVNLPL GVVALGFIIA KLPRLHSGLK PAIDYAGAAT LLLTVIPFLL ALTLDKNDFS
WTSPFIISLF AVSAIGLIFF LLIERRAESP ILPLHLFRNR TFTLTTIIGF TVGATLFAAI
FFLSLYLVNV LGVSATAAGT TLIPLTLSLV VGAMVSSQIV QRTGRYKWVI VGGMAIIVAA
LWWLTTLTPD TSVWMVRLRM IALGLGLGPS MPILNLAMQN AVPRTDMGAA TASRQFFQQL
GQVVGSAVFG ALLTGVLTTT LTANLAPIQA QLPPEMAARF DSSTLRNGMG AGEGASGETV
DPAVRIEQAI ADQFASRRDL LTRALRDADP AAIEALRADP QLPDQQKAML DMIGNLPAAA
RAQALDRVLA QLDRAEQKAR AEGRAIGEQI SAALKDAFTK SVTTIYWYAI WLAVIGLALA
LFIPELPLKQ NYGEDLPPLM E
|
|---|
| |