Gene Sterm_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3579 
Symbol 
ID8599025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3794845 
End bp3796272 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content36% 
IMG OID 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003310344 
Protein GI269122167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAA AAGATACAAA CTCATATAAA AATAAATGGA TAATATTAAT AACGGTTCTG 
CTTCTCATAT TTATGTCAAC ACTGGACGGA AGTATTGTTA ACGTAGCACT TCCTGCGCTT
TCAAGAGAGC TTGGTGTTTC CAACAGAGCT GTAAGCTGGG TTGTGTCCAG CTATCTCATA
ACAATCTGCA CTGTTATTCT CGTATTCGGG AAACTTGGAG ATATTACAGG AAAAACAAGA
GTATTCAAAT ATGGAGTTCT GCTTTTTACC TTTGGTTCTT TTCTATGCGG TTTTTCCTCA
TCGTTGGGAA TGCTCATTTT TTCAAGAGCA CTGCAGGCTG TGGGTGCTGC TGCTGCAATG
GCTACCAGCC AGGGAATTAT TACCCAGACT TTTCCAAAGC ATGAAAGAGG TAAGGCTCTA
GGATTAAGCG GAACTTTTGT TGCATTAGGA GCTATGACCG GTCCTCCTCT CGGCGGCTTC
CTGATTTCAA TATTTAACTG GAACTATATT TTCTATATAA ATGTACCTAT TGGAATAATT
GCATTTATTT TCTGCATGAA ATTTCTTCCC GAGGAAAAAT ATGAAAAAAT AAAGTTCCCT
GATATAAAAG GCTTTCTGCT TTTCTCTGCA GCTGTAATAA CTTTATTTAT AGCTATCATA
GAAGGTGAAA CAATGAAATA TACTAATCCT GTTATTCTTG CATGTTTTTT TGTTGCCATA
GTAAGTTTTA TAATATTTAT CTTTGTAGAA AAACGTACTG AAAGTCCTAT GCTTGATCTG
AACATATTTA AATCAAAGCT TTTTTCTATA AGTATTTTCT GTGCATTCAT AGTTTTTGTC
GCTACTTCAT CTGTTGGTAT TATACAGCCC TTTTATCTGC AGTATACAAT GAAATTTTCT
CCGGAAATGA CCGGACTTCT TATGATGGCT TATCCTGTAG TTATATCTGT TACTGCGCCG
AGCAGCGGTA CACTTTCAGA TAAAATAGGA TCGGAACTTC TGACTTTCCT CGGACTTTTG
ATTATCAGCA TCGGTTTATT TCTTATGGCA TTTTTGAATG AACATACACC TGTTGTATTA
TTTCTGGCAA TTGTAGTTGT TATGGCTTTT GGAGCTGGAT TATTTCAGTC GCCTAATAAT
TCTCTTATCA TGTCTACTGT TGAAAAAGAT AAACTTGGTA TAGCCGGAAG TGTTAATGCA
CTTATCAGAA ATCTCGGAAT GAGTGTGGGA ACAGCTATGT CCACCGCAAT ACTTTATTCC
AGAATGAGCA GTCTGGCAGG ATATGAAGTG ACAAGCTATA TCGCAGGAAG AGATGATATT
TTTATAAATT CCGTAAAATA TGTTTATATC ACGGCTGGTA TATTATGTAT AGCAGGAGCT
CTTATCACTT ATATGCGGCT TCATAATTCC AAAGTAAAAC ATTTTTAA
 
Protein sequence
MDEKDTNSYK NKWIILITVL LLIFMSTLDG SIVNVALPAL SRELGVSNRA VSWVVSSYLI 
TICTVILVFG KLGDITGKTR VFKYGVLLFT FGSFLCGFSS SLGMLIFSRA LQAVGAAAAM
ATSQGIITQT FPKHERGKAL GLSGTFVALG AMTGPPLGGF LISIFNWNYI FYINVPIGII
AFIFCMKFLP EEKYEKIKFP DIKGFLLFSA AVITLFIAII EGETMKYTNP VILACFFVAI
VSFIIFIFVE KRTESPMLDL NIFKSKLFSI SIFCAFIVFV ATSSVGIIQP FYLQYTMKFS
PEMTGLLMMA YPVVISVTAP SSGTLSDKIG SELLTFLGLL IISIGLFLMA FLNEHTPVVL
FLAIVVVMAF GAGLFQSPNN SLIMSTVEKD KLGIAGSVNA LIRNLGMSVG TAMSTAILYS
RMSSLAGYEV TSYIAGRDDI FINSVKYVYI TAGILCIAGA LITYMRLHNS KVKHF