| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_0558 |
|---|
| Symbol | |
|---|
| ID | 5345162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | + |
|---|
| Start bp | 637694 |
|---|
| End bp | 639310 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640838151 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001373902 |
|---|
| Protein GI | 152974385 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000222683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC AGGGTGGTAA AAAAAGGGGA TTATTGTTGG TTGGTTTAGT GATTGCGATA
TTATTTGCAG CGTTAGATGG AACAATCGTC GGTACAGCGA TGCCGCGTAT TGTCGGCGAA
CTAGGTGGAT TAAGCTTAAT GACATGGCTA GTAACAGCTT ACATGCTAAC ATCTACGACA
ATTGTACCGA TTGCAGGTAA ATTAGCGGAT TTATTAGGAC GCCGTAACGT ATATATGACA
GGATTAATTA TCTTTATGAT TGGTTCAGCA TTATGTGGTA TGGCAAATGG TATGACAGAA
TTGATTATTT TCCGCGGTAT TCAAGGTCTT GGCGGAGGTA TTATGATGCC GATGGCTATG
ATTATTATTG GAGATATGTT CACGGGGAAA GAGCGTGCGA AATGGCAAGG TATTGTTGGC
GCTTTATATG GTCTTGCTTC AGTCATTGGT CCGCAAGTTG GTGGTTGGAT TGTAGATGCA
GTTAACTGGA GATGGGTGTT TTACATTAAC TTACCAGTTG GTATTGTCGC AACAATCTTT
ATTGCGATGG GATTACACTC ACATAAGCAA ACAGGACCTA TTAAAATTGA CATTGCTGGA
ATTTTTACGA TGATTGTTGG AGTTGTAAGT TTATTACTTG CATTAACATT CGGCGGAAAA
GATTACGCAT GGGATTCTTG GCAAATTATC GGATTGTTTA GTTTAGCTTT AATTGGTATT
GTAAGCTTTG TATTTGTGGA AACAAAAGCT GAGGAACCAA TCTTACCGAT GCATTTCTTT
AAAAATCGTA CATTTACACT ATTGAATGCG ATTGGTTTCT TTATGAGTAT TGGAATGTTT
GGTGCAATTA TGTTCGTTCC ATTCTTTATG CAAGGAATTG TAGGAGTAAG TGCAGCTGAA
TCTGGGACGA TTATGACACC GATGATGATT ACAATGATTG TGACGAGTAT TATTGGTGGT
CGACTTGTCT TAAAAGTTGG CGTGAAGCCG CAGATTATTG TTGGTATGTT GATTATGGCT
GGTGGCTTCT GGTTATTAAC AACAATGGAT ATGCATACAA GCAAGCTTGT AGCGACTTCT
TATATGATCA TTATCGGTTT AGGTGTGGGG CTTGTAATGC CAACATTGAC ATTGGCATTA
CAAGAAAGTT TCCCGAAAAA GAATCTTGGT GTTGTAACCT CATCCAGTCA ATTTTTTCGG
CAAATTGGAG GAACATTTGG AATTACAATC TTAGGATCCA TTATGAATAA TACTTCAAGC
ACCATTTTAA CTGAAAAATT AGTACCCGTA TTAGAGAAGT TTCCACCACA AGCTGGACAG
ATTGTAACAA AATTTAAAGA TATGATTCAT ACAGATCCAC AAGGGTTATA TTCTATGCTG
TTTAGTCCAG AGGTATTGAA AAAAATGCCA GAAGTATTTT CTACAAGTAT CGTTCCTATT
TTGAAGAATT CGTTATTGGA TTCATTGCAT AGTGTATTTT TAGCGGGATT AGTATTTACT
GTTGTTGGTG CTATCTTTAC GATTTTCTTA GAGAAGATTA AGCTTTCTGA TCGAAAGAAA
GGTGCAGAAG AGGTAGTAGA AGGAGAAGAG AAACATACAA ATGGATCCTA TTCATAA
|
|---|
| Protein sequence | MKQQGGKKRG LLLVGLVIAI LFAALDGTIV GTAMPRIVGE LGGLSLMTWL VTAYMLTSTT
IVPIAGKLAD LLGRRNVYMT GLIIFMIGSA LCGMANGMTE LIIFRGIQGL GGGIMMPMAM
IIIGDMFTGK ERAKWQGIVG ALYGLASVIG PQVGGWIVDA VNWRWVFYIN LPVGIVATIF
IAMGLHSHKQ TGPIKIDIAG IFTMIVGVVS LLLALTFGGK DYAWDSWQII GLFSLALIGI
VSFVFVETKA EEPILPMHFF KNRTFTLLNA IGFFMSIGMF GAIMFVPFFM QGIVGVSAAE
SGTIMTPMMI TMIVTSIIGG RLVLKVGVKP QIIVGMLIMA GGFWLLTTMD MHTSKLVATS
YMIIIGLGVG LVMPTLTLAL QESFPKKNLG VVTSSSQFFR QIGGTFGITI LGSIMNNTSS
TILTEKLVPV LEKFPPQAGQ IVTKFKDMIH TDPQGLYSML FSPEVLKKMP EVFSTSIVPI
LKNSLLDSLH SVFLAGLVFT VVGAIFTIFL EKIKLSDRKK GAEEVVEGEE KHTNGSYS
|
|---|
| |