Gene Dred_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0455 
Symbol 
ID4956530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp497012 
End bp498556 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content48% 
IMG OID640179625 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001111826 
Protein GI134298330 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGG TAATCGGGGC CTTTATGGCG ATTTTAGACA GCAGTATTGT CAACGTTGCA 
CTGCCTCGTT TTATGACCCT CTTCGGTTCC TCGGCGGATG AAATTCAATG GATTCTGACC
GGCTACATGC TAACCTCCGG AGTGGTGGTG CCCATTACCG GTTATCTGGG GGACCGATTT
GGCAACAAGC GTATGTATAT CTGGTCGGTG GCAGCCTTTA CCATAGGGTC TTTGCTTTGC
GGTCTGGCCT GGAGCACCAA TTCTCTGACC ATATTCCGGG TCATTCAGGC CATTGGCGGT
GGTATGATTA TTCCCATCAG TATGGCCATG ATCTATCGTA TTATTCCTCG GCAGAAGATA
GGTATGGCTC TGGGGATCTG GGGTATTGCT GCCATTATGG CACCGGCCAT TGGTCCTACC
CTAGGGGGCT ATCTGGTGGA TCATTTCAGT TGGCAGTGGA TCTTTACCAT TAACATCCCC
ATTGGCATAG CCGCCATTAT GTTGTCCATT GCATACCTGG AAGAAACACC GATACAAAAA
AATCTGAAAC CGGATATTCC TGGAATTTTA TTGAGTTCAG TGGGCTGCTT TGCACTGCTG
TTGGCCCTTA GTGAGGGACA GGATAAGGGA TGGACCTCCC AGTATATTGT TACTTTACTG
GTTCTATCGG CCTTTACGCT AATTCTCTTT GTCATGTGGG AGTTGCAAGC ACCAAACCCG
CTTATCGATA TCCGGTTGTT GAATAATCCA GTCTTATCTG CCAGTTTGCT GGCCACTTGC
ATTGCCACCA TTGGATTATT CTCGGCGGTT TTCTTAATCC CCATCTATGC TCAAAACCTG
CTAGGTTATA CTCCAATGGA AACAGGCTTA ATGATGATGC CGATGGCCCT TGTAACCGGC
TTCATGATGC CCATTAGCGG TAAGCTGTTT GATAAATTTG GTGCCTTTTG GCTTGGTATT
GTCGGGATGT CCATTGTTGT GGGGGTAACC TATTACCTGC ATACCCTTGG TCTGGATACA
AGTTACCACC ATATCCAGAT CATATTATCC ATCAGGGCTG TGGGTTTAGG CTTGGCCACT
ATGCCCCTGA CCACAGCCGG CATGAATACA GTTCCTAGGT TTTTGGTGGG CAGGGCATCG
GCCCTTAATA ATACCGTAAG ACAAATCTCT GGTTCAATGG GCATTGCCTA TTTAACTTAT
GTCATGCTGC AACGCCAGGC CTACCACACA GCCATTCTAA CTGAAGGAGT CAGTATAAGT
TCAATGGCAG CTGTACAGGC CCAGGGGCAA ATGCAAAGTT ACCTAGCTGC CAACGGAATG
GCTGGTCAGG CAGCGGCTCA GGGGTCTTTA GGGATCATTT CCGGCTTAAT AGCTCGTCAG
TCCTTCATGA CTGCACTGGA TGACACCTTT GTGGTTAGCG CCATTATTAT TGCCTTTGTT
TTACCTATGA TGTTCCTGCT GAGCAAACAC AGAGTGGAGA AAGAAAGAAA AAGACAGGAA
GCAAGATATG CACATTTGTT TCAGGGAACC TCCGGCGTCA TATAA
 
Protein sequence
MILVIGAFMA ILDSSIVNVA LPRFMTLFGS SADEIQWILT GYMLTSGVVV PITGYLGDRF 
GNKRMYIWSV AAFTIGSLLC GLAWSTNSLT IFRVIQAIGG GMIIPISMAM IYRIIPRQKI
GMALGIWGIA AIMAPAIGPT LGGYLVDHFS WQWIFTINIP IGIAAIMLSI AYLEETPIQK
NLKPDIPGIL LSSVGCFALL LALSEGQDKG WTSQYIVTLL VLSAFTLILF VMWELQAPNP
LIDIRLLNNP VLSASLLATC IATIGLFSAV FLIPIYAQNL LGYTPMETGL MMMPMALVTG
FMMPISGKLF DKFGAFWLGI VGMSIVVGVT YYLHTLGLDT SYHHIQIILS IRAVGLGLAT
MPLTTAGMNT VPRFLVGRAS ALNNTVRQIS GSMGIAYLTY VMLQRQAYHT AILTEGVSIS
SMAAVQAQGQ MQSYLAANGM AGQAAAQGSL GIISGLIARQ SFMTALDDTF VVSAIIIAFV
LPMMFLLSKH RVEKERKRQE ARYAHLFQGT SGVI