More than 300 homologs were found in PanDaTox collection
for query gene Bcav_1954 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_1954  binding-protein-dependent transport systems inner membrane component  100 
 
 
359 aa  706    Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00299224 
 
 
-
 
NC_013530  Xcel_1139  binding-protein-dependent transport systems inner membrane component  73.49 
 
 
372 aa  525  1e-148  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.888329  n/a   
 
 
-
 
NC_013521  Sked_06330  carbohydrate ABC transporter membrane protein  69.14 
 
 
368 aa  468  1.0000000000000001e-131  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2715  binding-protein-dependent transporter inner membrane component  58.36 
 
 
350 aa  392  1e-108  Thermobispora bispora DSM 43833  Bacteria  normal  0.392142  normal 
 
 
-
 
NC_013595  Sros_3957  sugar transport system (permease)  56.71 
 
 
365 aa  348  6e-95  Streptosporangium roseum DSM 43021  Bacteria  normal  0.225692  normal  0.0349833 
 
 
-
 
NC_013131  Caci_6731  binding-protein-dependent transport systems inner membrane component  57.14 
 
 
337 aa  348  9e-95  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0579092  normal 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  38.14 
 
 
299 aa  201  9.999999999999999e-51  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  34.67 
 
 
301 aa  187  3e-46  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  37.13 
 
 
310 aa  186  5e-46  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4082  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
302 aa  171  2e-41  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
299 aa  170  4e-41  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  31.45 
 
 
295 aa  169  9e-41  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
415 aa  168  1e-40  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  33.83 
 
 
417 aa  166  6.9999999999999995e-40  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_011831  Cagg_2266  binding-protein-dependent transport systems inner membrane component  35.65 
 
 
296 aa  166  6.9999999999999995e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000392628 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  33.53 
 
 
300 aa  164  3e-39  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  33.33 
 
 
293 aa  162  7e-39  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3147  binding-protein-dependent transport systems inner membrane component  35.33 
 
 
319 aa  161  2e-38  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00382098  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
293 aa  160  3e-38  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  35.12 
 
 
353 aa  160  4e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  33.23 
 
 
314 aa  160  4e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  31.2 
 
 
298 aa  159  1e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  33.43 
 
 
317 aa  158  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
309 aa  157  3e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0143  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
402 aa  154  2e-36  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0513  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
314 aa  154  2.9999999999999998e-36  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  33.13 
 
 
320 aa  153  4e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  28.92 
 
 
295 aa  153  4e-36  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
305 aa  153  4e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  31.64 
 
 
317 aa  153  5.9999999999999996e-36  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  30.93 
 
 
299 aa  151  1e-35  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
320 aa  151  1e-35  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  31.16 
 
 
298 aa  150  3e-35  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2111  binding-protein-dependent transport systems inner membrane component  28.44 
 
 
306 aa  150  3e-35  Clostridium cellulolyticum H10  Bacteria  normal  0.157384  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
309 aa  150  4e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009620  Smed_4135  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
299 aa  149  5e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  33.84 
 
 
293 aa  149  5e-35  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013411  GYMC61_0532  binding-protein-dependent transport systems inner membrane component  31.31 
 
 
311 aa  150  5e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  31.88 
 
 
321 aa  149  1.0000000000000001e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  32.94 
 
 
325 aa  147  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  34.45 
 
 
291 aa  147  3e-34  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
305 aa  147  4.0000000000000006e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_010001  Cphy_1530  binding-protein-dependent transport systems inner membrane component  28.31 
 
 
295 aa  146  4.0000000000000006e-34  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
314 aa  146  5e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_013131  Caci_4985  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
313 aa  146  6e-34  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00226923  hitchhiker  0.00373728 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  31.56 
 
 
307 aa  146  6e-34  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
307 aa  146  6e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
292 aa  145  8.000000000000001e-34  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011661  Dtur_0507  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
299 aa  145  1e-33  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000030377  n/a   
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
293 aa  145  1e-33  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  35.35 
 
 
310 aa  144  2e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  33.44 
 
 
294 aa  144  2e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_011899  Hore_00390  binding-protein-dependent transport systems inner membrane component  29.76 
 
 
382 aa  144  2e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0631  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
363 aa  144  3e-33  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  33.53 
 
 
305 aa  144  3e-33  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  35.28 
 
 
307 aa  143  4e-33  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_010003  Pmob_0827  binding-protein-dependent transport systems inner membrane component  30.72 
 
 
299 aa  143  4e-33  Petrotoga mobilis SJ95  Bacteria  normal  0.175132  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  30.03 
 
 
321 aa  143  5e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_012854  Rleg_6527  binding-protein-dependent transport systems inner membrane component  31.98 
 
 
307 aa  143  5e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0292278 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  32.33 
 
 
288 aa  142  6e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  33.43 
 
 
305 aa  142  6e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
314 aa  142  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
314 aa  142  9.999999999999999e-33  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
319 aa  142  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0750  binding-protein-dependent transport systems inner membrane component  31.87 
 
 
366 aa  141  1.9999999999999998e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0908465  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
309 aa  141  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  30.92 
 
 
317 aa  140  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2496  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
311 aa  141  1.9999999999999998e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0524  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
303 aa  140  1.9999999999999998e-32  Petrotoga mobilis SJ95  Bacteria  normal  0.693678  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
318 aa  140  3e-32  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
317 aa  140  4.999999999999999e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
308 aa  139  4.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  29.23 
 
 
308 aa  139  6e-32  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  32.01 
 
 
320 aa  139  1e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  31.42 
 
 
297 aa  138  1e-31  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  33.23 
 
 
318 aa  138  1e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
313 aa  138  2e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
330 aa  137  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  31.34 
 
 
294 aa  137  3.0000000000000003e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
294 aa  137  3.0000000000000003e-31  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
279 aa  137  3.0000000000000003e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  30.84 
 
 
292 aa  137  3.0000000000000003e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
307 aa  137  4e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  31.25 
 
 
307 aa  137  4e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  30.12 
 
 
316 aa  137  4e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
283 aa  135  9e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
316 aa  135  9e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_12339  sugar-transport integral membrane protein ABC transporter uspA  32.64 
 
 
290 aa  135  9e-31  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29440  permease component of ABC-type sugar transporter  31.52 
 
 
318 aa  135  9.999999999999999e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
315 aa  135  9.999999999999999e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
316 aa  135  9.999999999999999e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  28.22 
 
 
305 aa  135  9.999999999999999e-31  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  30.84 
 
 
302 aa  134  1.9999999999999998e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  30.47 
 
 
300 aa  134  3e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  32.24 
 
 
311 aa  134  3e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
294 aa  134  3e-30  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  30.21 
 
 
318 aa  134  3.9999999999999996e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  30.72 
 
 
314 aa  133  3.9999999999999996e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
319 aa  133  5e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_014212  Mesil_2791  binding-protein-dependent transport systems inner membrane component  31.59 
 
 
364 aa  133  5e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.32396 
 
 
-
 
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