Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2266 |
Symbol | |
ID | 7266679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 2766845 |
End bp | 2767735 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643567097 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002463582 |
Protein GI | 219849149 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000392628 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCACGA CAAATTGGCG TCGTAAGTGG GCTGACGCAC TGAACGGCTA TCTCTTTATT TCGCCATGGT TGATCATCTT TATCATCTTT AGTCTGATCT CGCTCGGTTA CGCGGTCTAT CTCTCGTTCA CCGAATACAA CCTGCTCAGA CCGCCGCGCT GGTGGGGTTT TGAAGGGTAT CAGCGAGTCT TCGCCGATGA TCTCTTCTTG AGTAAAGCAC TACCCAATAC TTTCAAGTAT GCGCTGATCG TCGTGCCGAT CCAAACGTTT CTCAGCCTGG TGCTGGCGTT TGCAATGGAT CAAAACCTGC GTTTCCAGCG TTTCTTCCGC ACCATTTTTT ACCTGCCATC GGTGACATCA TCGGTGGTGA TTTCACTCAT CTTTATCTGG ATCTTCGCAC CGCAGGGTAT TTTCAACCAG ATCACCGGTC TTACCGTCAA CTGGTTGGAT GATCCGCGCA CCGCTTTCTA CGTGATTATG GGCATGAACA TCTTTACCAC AAGTGGTACG CTCATGCTCA TCTTTCTCGC CGGCCTGCAA GATATTCCAC TAGCCGTGTA TGAAGCAGCC GAGATTGACG GCGCCAACGG CTTGCAGAAG TTTTTCTACA TTACCATCCC GATGTTACGC CCGGTCATTT TCTTTGTCGT GACGGTCGGT GTCATCGGCT GTTTTCAGGT CTTTGACCAG ATCTTTGTGA TGACGAGTGG CGGCCCGCTC GATAGCACTA CGACCATTAC CTATTTGATC TACAAGTGGG CCTTCCGCGA TACACGCATT CAGATGGGCC AGGCTTCAGC GCTGGCGGTG ATTCTGACCC TGATCATCCT GGCAGTAACC CTGCTGCAAC GGCGCGTGAT TGAAGGCAGT GGTAGTGGGG TTGAGCGTTA G
|
Protein sequence | MRTTNWRRKW ADALNGYLFI SPWLIIFIIF SLISLGYAVY LSFTEYNLLR PPRWWGFEGY QRVFADDLFL SKALPNTFKY ALIVVPIQTF LSLVLAFAMD QNLRFQRFFR TIFYLPSVTS SVVISLIFIW IFAPQGIFNQ ITGLTVNWLD DPRTAFYVIM GMNIFTTSGT LMLIFLAGLQ DIPLAVYEAA EIDGANGLQK FFYITIPMLR PVIFFVVTVG VIGCFQVFDQ IFVMTSGGPL DSTTTITYLI YKWAFRDTRI QMGQASALAV ILTLIILAVT LLQRRVIEGS GSGVER
|
| |