Gene Cagg_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2266 
Symbol 
ID7266679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2766845 
End bp2767735 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content51% 
IMG OID643567097 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002463582 
Protein GI219849149 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000392628 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCACGA CAAATTGGCG TCGTAAGTGG GCTGACGCAC TGAACGGCTA TCTCTTTATT 
TCGCCATGGT TGATCATCTT TATCATCTTT AGTCTGATCT CGCTCGGTTA CGCGGTCTAT
CTCTCGTTCA CCGAATACAA CCTGCTCAGA CCGCCGCGCT GGTGGGGTTT TGAAGGGTAT
CAGCGAGTCT TCGCCGATGA TCTCTTCTTG AGTAAAGCAC TACCCAATAC TTTCAAGTAT
GCGCTGATCG TCGTGCCGAT CCAAACGTTT CTCAGCCTGG TGCTGGCGTT TGCAATGGAT
CAAAACCTGC GTTTCCAGCG TTTCTTCCGC ACCATTTTTT ACCTGCCATC GGTGACATCA
TCGGTGGTGA TTTCACTCAT CTTTATCTGG ATCTTCGCAC CGCAGGGTAT TTTCAACCAG
ATCACCGGTC TTACCGTCAA CTGGTTGGAT GATCCGCGCA CCGCTTTCTA CGTGATTATG
GGCATGAACA TCTTTACCAC AAGTGGTACG CTCATGCTCA TCTTTCTCGC CGGCCTGCAA
GATATTCCAC TAGCCGTGTA TGAAGCAGCC GAGATTGACG GCGCCAACGG CTTGCAGAAG
TTTTTCTACA TTACCATCCC GATGTTACGC CCGGTCATTT TCTTTGTCGT GACGGTCGGT
GTCATCGGCT GTTTTCAGGT CTTTGACCAG ATCTTTGTGA TGACGAGTGG CGGCCCGCTC
GATAGCACTA CGACCATTAC CTATTTGATC TACAAGTGGG CCTTCCGCGA TACACGCATT
CAGATGGGCC AGGCTTCAGC GCTGGCGGTG ATTCTGACCC TGATCATCCT GGCAGTAACC
CTGCTGCAAC GGCGCGTGAT TGAAGGCAGT GGTAGTGGGG TTGAGCGTTA G
 
Protein sequence
MRTTNWRRKW ADALNGYLFI SPWLIIFIIF SLISLGYAVY LSFTEYNLLR PPRWWGFEGY 
QRVFADDLFL SKALPNTFKY ALIVVPIQTF LSLVLAFAMD QNLRFQRFFR TIFYLPSVTS
SVVISLIFIW IFAPQGIFNQ ITGLTVNWLD DPRTAFYVIM GMNIFTTSGT LMLIFLAGLQ
DIPLAVYEAA EIDGANGLQK FFYITIPMLR PVIFFVVTVG VIGCFQVFDQ IFVMTSGGPL
DSTTTITYLI YKWAFRDTRI QMGQASALAV ILTLIILAVT LLQRRVIEGS GSGVER