More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_4512 on replicon NC_010552
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009079  BMA10247_A1016  EmrB/QacA family drug resistance transporter  78.93 
 
 
504 aa  716    Burkholderia mallei NCTC 10247  Bacteria  normal  0.80336  n/a   
 
 
-
 
NC_008835  BMA10229_0550  EmrB/QacA family drug resistance transporter  78.93 
 
 
504 aa  716    Burkholderia mallei NCTC 10229  Bacteria  normal  0.976745  n/a   
 
 
-
 
NC_006349  BMAA1299  EmrB/QacA family drug resistance transporter  79.13 
 
 
504 aa  718    Burkholderia mallei ATCC 23344  Bacteria  normal  0.144452  n/a   
 
 
-
 
NC_010515  Bcenmc03_5634  EmrB/QacA family drug resistance transporter  92.26 
 
 
504 aa  844    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.327669 
 
 
-
 
NC_007435  BURPS1710b_A2533  EmrB/QacA family drug resistance transporter  78.93 
 
 
519 aa  716    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3357  EmrB/QacA family drug resistance transporter  72.32 
 
 
505 aa  645    Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.000000299723 
 
 
-
 
NC_007511  Bcep18194_B1157  EmrB/QacA family drug resistance transporter  91.27 
 
 
504 aa  865    Burkholderia sp. 383  Bacteria  normal  0.153598  normal  0.545064 
 
 
-
 
NC_009078  BURPS1106A_A1278  EmrB/QacA family drug resistance transporter  78.73 
 
 
504 aa  712    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1465  EmrB/QacA family drug resistance transporter  80.12 
 
 
504 aa  732    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1779  major facilitator superfamily multidrug efflux transporter  72.58 
 
 
520 aa  679    Burkholderia xenovorans LB400  Bacteria  normal  0.38448  unclonable  0.00000000116602 
 
 
-
 
NC_009075  BURPS668_A1356  EmrB/QacA family drug resistance transporter  79.13 
 
 
504 aa  716    Burkholderia pseudomallei 668  Bacteria  normal  0.991135  n/a   
 
 
-
 
NC_008061  Bcen_3702  EmrB/QacA family drug resistance transporter  92.06 
 
 
509 aa  845    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4512  EmrB/QacA family drug resistance transporter  100 
 
 
504 aa  981    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4056  EmrB/QacA family drug resistance transporter  98.41 
 
 
509 aa  964    Burkholderia ambifaria AMMD  Bacteria  normal  0.010273  normal  0.647251 
 
 
-
 
NC_008784  BMASAVP1_0279  EmrB/QacA family drug resistance transporter  79.13 
 
 
504 aa  718    Burkholderia mallei SAVP1  Bacteria  normal  0.2584  n/a   
 
 
-
 
NC_008543  Bcen2424_4666  EmrB/QacA family drug resistance transporter  92.06 
 
 
509 aa  845    Burkholderia cenocepacia HI2424  Bacteria  normal  0.481677  normal  0.435005 
 
 
-
 
NC_010086  Bmul_4024  EmrB/QacA family drug resistance transporter  88.67 
 
 
509 aa  832    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.179138  normal  0.623334 
 
 
-
 
NC_010676  Bphyt_4890  drug resistance transporter, EmrB/QacA subfamily  73.18 
 
 
513 aa  671    Burkholderia phytofirmans PsJN  Bacteria  normal  0.0326454  normal  0.212856 
 
 
-
 
NC_009832  Spro_2480  EmrB/QacA family drug resistance transporter  66.52 
 
 
504 aa  619  1e-176  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0043  EmrB/QacA family drug resistance transporter  64.45 
 
 
504 aa  608  1e-173  Enterobacter sp. 638  Bacteria  normal  0.258133  normal  0.869121 
 
 
-
 
NC_010322  PputGB1_3285  EmrB/QacA family drug resistance transporter  64.07 
 
 
501 aa  563  1.0000000000000001e-159  Pseudomonas putida GB-1  Bacteria  normal  normal  0.791434 
 
 
-
 
NC_013739  Cwoe_3291  drug resistance transporter, EmrB/QacA subfamily  53.61 
 
 
666 aa  475  1e-133  Conexibacter woesei DSM 14684  Bacteria  normal  0.47407  normal 
 
 
-
 
NC_013131  Caci_8279  drug resistance transporter, EmrB/QacA subfamily  50.4 
 
 
680 aa  462  1e-129  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270413  normal 
 
 
-
 
NC_007777  Francci3_0717  EmrB/QacA family drug resistance transporter  52.48 
 
 
558 aa  442  1e-123  Frankia sp. CcI3  Bacteria  normal  normal  0.770491 
 
 
-
 
NC_013595  Sros_8653  Arabinose efflux permease-like protein  51.11 
 
 
666 aa  438  9.999999999999999e-123  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_1036  drug resistance transporter, EmrB/QacA subfamily  51.9 
 
 
672 aa  434  1e-120  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1890  EmrB/QacA family drug resistance transporter  48.35 
 
 
569 aa  429  1e-119  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2169  EmrB/QacA family drug resistance transporter  48.35 
 
 
554 aa  422  1e-117  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4163  drug resistance transporter, EmrB/QacA subfamily  49.39 
 
 
676 aa  419  1e-116  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3709  EmrB/QacA family drug resistance transporter  45.42 
 
 
522 aa  421  1e-116  Salinispora tropica CNB-440  Bacteria  normal  0.486595  normal 
 
 
-
 
NC_009338  Mflv_3321  EmrB/QacA family drug resistance transporter  47.13 
 
 
650 aa  412  1e-114  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.157992  normal  0.0742968 
 
 
-
 
NC_009077  Mjls_2786  EmrB/QacA family drug resistance transporter  45.66 
 
 
682 aa  410  1e-113  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3945  EmrB/QacA family drug resistance transporter  45.83 
 
 
528 aa  409  1e-113  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00181565  hitchhiker  0.00620132 
 
 
-
 
NC_008146  Mmcs_2756  EmrB/QacA family drug resistance transporter  45.66 
 
 
682 aa  411  1e-113  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2800  EmrB/QacA family drug resistance transporter  45.66 
 
 
682 aa  411  1e-113  Mycobacterium sp. KMS  Bacteria  normal  0.375758  normal  0.713659 
 
 
-
 
NC_008726  Mvan_3042  EmrB/QacA family drug resistance transporter  45.36 
 
 
685 aa  409  1e-113  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.141693  normal 
 
 
-
 
NC_014165  Tbis_1314  EmrB/QacA subfamily drug resistance transporter  46.88 
 
 
535 aa  408  1.0000000000000001e-112  Thermobispora bispora DSM 43833  Bacteria  decreased coverage  0.00952843  normal  0.308238 
 
 
-
 
NC_013521  Sked_05770  drug resistance transporter, EmrB/QacA subfamily  46.7 
 
 
528 aa  399  9.999999999999999e-111  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.148276  normal 
 
 
-
 
NC_013093  Amir_4864  drug resistance transporter, EmrB/QacA subfamily  46.2 
 
 
685 aa  401  9.999999999999999e-111  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2318  drug resistance transporter, EmrB/QacA subfamily  42.6 
 
 
678 aa  399  9.999999999999999e-111  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0275  drug resistance transporter, EmrB/QacA subfamily  44.07 
 
 
539 aa  396  1e-109  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.269312  normal  0.0148555 
 
 
-
 
NC_013947  Snas_5185  drug resistance transporter, EmrB/QacA subfamily  46.33 
 
 
525 aa  398  1e-109  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.804488  normal  0.490544 
 
 
-
 
NC_009953  Sare_4090  EmrB/QacA family drug resistance transporter  45.53 
 
 
523 aa  389  1e-107  Salinispora arenicola CNS-205  Bacteria  normal  0.588022  normal  0.0353646 
 
 
-
 
NC_013235  Namu_3817  drug resistance transporter, EmrB/QacA subfamily  45.38 
 
 
697 aa  388  1e-106  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.00137036  normal  0.060926 
 
 
-
 
NC_013947  Snas_6232  drug resistance transporter, EmrB/QacA subfamily  44.79 
 
 
535 aa  379  1e-104  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2050  EmrB/QacA family drug resistance transporter  46.31 
 
 
516 aa  379  1e-103  Streptosporangium roseum DSM 43021  Bacteria  normal  0.851205  normal 
 
 
-
 
NC_008541  Arth_1179  EmrB/QacA family drug resistance transporter  43.42 
 
 
538 aa  376  1e-103  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00903391  n/a   
 
 
-
 
NC_011761  AFE_0922  drug resistance transporter, EmrB/QacA family  54.03 
 
 
487 aa  374  1e-102  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1041  major facilitator superfamily MFS_1  54.03 
 
 
487 aa  374  1e-102  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  hitchhiker  0.0000138776 
 
 
-
 
NC_011886  Achl_1250  drug resistance transporter, EmrB/QacA subfamily  41.8 
 
 
567 aa  372  1e-102  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000544425 
 
 
-
 
NC_013595  Sros_6564  EmrB/QacA family drug resistance transporter  43.74 
 
 
526 aa  370  1e-101  Streptosporangium roseum DSM 43021  Bacteria  normal  0.569718  normal  0.0165949 
 
 
-
 
NC_013131  Caci_0662  drug resistance transporter, EmrB/QacA subfamily  44.44 
 
 
525 aa  370  1e-101  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0391  drug resistance transporter, EmrB/QacA subfamily  42.83 
 
 
530 aa  365  1e-99  Jonesia denitrificans DSM 20603  Bacteria  normal  0.979828  normal 
 
 
-
 
NC_013174  Jden_0388  drug resistance transporter, EmrB/QacA subfamily  44.98 
 
 
532 aa  359  7e-98  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3298  drug resistance transporter, EmrB/QacA subfamily  39.68 
 
 
538 aa  359  8e-98  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_0326  EmrB/QacA family drug resistance transporter  39.41 
 
 
539 aa  354  2e-96  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0241  EmrB/QacA family drug resistance transporter  41.65 
 
 
523 aa  354  2e-96  Caulobacter sp. K31  Bacteria  normal  0.232516  normal 
 
 
-
 
NC_012793  GWCH70_3147  drug resistance transporter, EmrB/QacA subfamily  39.59 
 
 
541 aa  349  8e-95  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2988  EmrB/QacA family drug resistance transporter  43.88 
 
 
514 aa  346  5e-94  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0720  putative multidrug resistance protein  36.17 
 
 
537 aa  339  5e-92  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  3.55065e-20 
 
 
-
 
NC_005957  BT9727_0574  multidrug resistance protein B; sugar (and other) transporter  36.17 
 
 
537 aa  339  5e-92  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0573  multidrug-efflux transporter  36.17 
 
 
537 aa  339  5e-92  Bacillus cereus E33L  Bacteria  normal  0.0295676  n/a   
 
 
-
 
NC_009565  TBFG_11905  integral membrane protein  43.15 
 
 
687 aa  340  5e-92  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0792  putative multidrug resistance protein  36.17 
 
 
537 aa  339  7e-92  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000149033  n/a   
 
 
-
 
NC_003909  BCE_0731  EmrB/QacA family drug resistance transporter  36.17 
 
 
537 aa  339  8e-92  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1424  major facilitator family transporter  39.45 
 
 
537 aa  338  9.999999999999999e-92  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000410629  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0577  EmrB/QacA family drug resistance transporter  35.98 
 
 
537 aa  338  9.999999999999999e-92  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0695  putative multidrug resistance protein  35.78 
 
 
537 aa  337  2.9999999999999997e-91  Bacillus cereus B4264  Bacteria  normal  0.0299481  n/a   
 
 
-
 
NC_013169  Ksed_14720  drug resistance transporter, EmrB/QacA subfamily  41.91 
 
 
524 aa  337  3.9999999999999995e-91  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.584953  normal  0.369508 
 
 
-
 
NC_011772  BCG9842_B4643  putative multidrug resistance protein  35.78 
 
 
537 aa  337  3.9999999999999995e-91  Bacillus cereus G9842  Bacteria  hitchhiker  0.00119486  unclonable  1.5256899999999999e-25 
 
 
-
 
NC_013204  Elen_0210  drug resistance transporter, EmrB/QacA subfamily  41.02 
 
 
592 aa  337  3.9999999999999995e-91  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.852197 
 
 
-
 
NC_009664  Krad_4278  drug resistance transporter, EmrB/QacA subfamily  41.32 
 
 
685 aa  335  7.999999999999999e-91  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00129972  normal  0.114111 
 
 
-
 
NC_014158  Tpau_0550  tRNA-guanine transglycosylase, various specificities  40.42 
 
 
1062 aa  335  1e-90  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0763  drug resistance transporter, EmrB/QacA subfamily  36.81 
 
 
641 aa  333  6e-90  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2612  drug resistance transporter, EmrB/QacA subfamily  36.73 
 
 
565 aa  331  2e-89  Thermobaculum terrenum ATCC BAA-798  Bacteria  unclonable  0.000000000331464  n/a   
 
 
-
 
NC_005945  BAS0630  multidrug-efflux transporter  37.79 
 
 
476 aa  329  8e-89  Bacillus anthracis str. Sterne  Bacteria  normal  0.0118993  n/a   
 
 
-
 
NC_009674  Bcer98_0558  EmrB/QacA family drug resistance transporter  35.42 
 
 
538 aa  329  8e-89  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000222683  n/a   
 
 
-
 
NC_013757  Gobs_4672  drug resistance transporter, EmrB/QacA subfamily  41.45 
 
 
593 aa  328  1.0000000000000001e-88  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.349364  n/a   
 
 
-
 
NC_013510  Tcur_4394  major facilitator superfamily MFS_1  42.61 
 
 
538 aa  327  2.0000000000000001e-88  Thermomonospora curvata DSM 43183  Bacteria  normal  0.497016  n/a   
 
 
-
 
NC_014211  Ndas_5486  major facilitator superfamily MFS_1  39.19 
 
 
584 aa  327  3e-88  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0573143  normal 
 
 
-
 
NC_012669  Bcav_2560  drug resistance transporter, EmrB/QacA subfamily  38.01 
 
 
557 aa  324  2e-87  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.577395  normal  0.137403 
 
 
-
 
NC_013093  Amir_0306  drug resistance transporter, EmrB/QacA subfamily  38.09 
 
 
555 aa  323  3e-87  Actinosynnema mirum DSM 43827  Bacteria  normal  0.509937  n/a   
 
 
-
 
NC_008148  Rxyl_0614  EmrB/QacA family drug resistance transporter  38.49 
 
 
607 aa  322  7e-87  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.222069  n/a   
 
 
-
 
NC_013441  Gbro_4024  drug resistance transporter, EmrB/QacA subfamily  37.92 
 
 
562 aa  322  9.999999999999999e-87  Gordonia bronchialis DSM 43247  Bacteria  normal  0.736768  n/a   
 
 
-
 
NC_009664  Krad_2535  drug resistance transporter, EmrB/QacA subfamily  41.48 
 
 
575 aa  321  1.9999999999999998e-86  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3811  major facilitator superfamily MFS_1  39.45 
 
 
512 aa  318  1e-85  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4795  drug resistance transporter, EmrB/QacA subfamily  39.59 
 
 
534 aa  317  3e-85  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.29039  n/a   
 
 
-
 
NC_014212  Mesil_0740  drug resistance transporter, EmrB/QacA subfamily  44.29 
 
 
615 aa  315  9.999999999999999e-85  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.0000446229  decreased coverage  0.00171071 
 
 
-
 
NC_013131  Caci_5285  major facilitator superfamily MFS_1  41.47 
 
 
491 aa  314  2.9999999999999996e-84  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2111  drug resistance transporter, EmrB/QacA subfamily  37.83 
 
 
528 aa  314  2.9999999999999996e-84  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.534364  n/a   
 
 
-
 
NC_013131  Caci_5139  drug resistance transporter, EmrB/QacA subfamily  42.52 
 
 
519 aa  314  2.9999999999999996e-84  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.306727  normal 
 
 
-
 
NC_010184  BcerKBAB4_3829  EmrB/QacA family drug resistance transporter  36.31 
 
 
513 aa  313  4.999999999999999e-84  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.000236934  n/a   
 
 
-
 
NC_013757  Gobs_2339  drug resistance transporter, EmrB/QacA subfamily  40.59 
 
 
918 aa  312  1e-83  Geodermatophilus obscurus DSM 43160  Bacteria  decreased coverage  0.00297311  n/a   
 
 
-
 
NC_013521  Sked_23860  drug resistance transporter, EmrB/QacA subfamily  36.5 
 
 
572 aa  312  1e-83  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0809765  normal 
 
 
-
 
NC_007650  BTH_II0295  EmrB/QacA family drug resistance transporter  39.79 
 
 
565 aa  312  1e-83  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4051  EmrB/QacA family drug resistance transporter  35.68 
 
 
513 aa  311  2e-83  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000130909  n/a   
 
 
-
 
NC_011658  BCAH187_A4122  drug resistance transporter, EmrB/QacA family  35.68 
 
 
513 aa  311  2e-83  Bacillus cereus AH187  Bacteria  unclonable  0.0000000107671  n/a   
 
 
-
 
NC_011772  BCG9842_B1134  drug resistance transporter, EmrB/QacA family  35.98 
 
 
513 aa  310  4e-83  Bacillus cereus G9842  Bacteria  decreased coverage  0.000000214385  normal 
 
 
-
 
NC_011725  BCB4264_A4105  drug resistance transporter, EmrB/QacA family  35.85 
 
 
513 aa  310  4e-83  Bacillus cereus B4264  Bacteria  decreased coverage  0.00176585  n/a   
 
 
-
 
NC_007530  GBAA_4216  EmrB/QacA family drug resistance transporter  35.64 
 
 
513 aa  309  9e-83  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000000209346  n/a   
 
 
-
 
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