| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2988 |
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| Symbol | |
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| ID | 3581912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3499590 |
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| End bp | 3501134 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686719 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_291044 |
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| Protein GI | 72163387 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGC CTGCCCGCTC GGACTCCTCC GAGACAAGCC CGGCCCCTAT CACCCGGCGC
AGCGTCGTCC TGATCTTCCT CGCCTTGATG CTGGCGATGC TGCTGGCCTC GCTCAACCAG
ACCGTGTTGA GTACCGCCCT GCCCACCATG GTCGGCGAGC TCAACGGTGT CGACCAGATG
CTGTGGGTGA TGACGGCCTT CATCTTGGCG TCGACCATCA TGATGCCGAT CTACGGCAAA
CTCGGCGACC TCATCGGCCG CAAAGGCCTT TTCCTCGCCG CCATCTCCCT CTTCATCGCG
GGCTCGGTGA TCGGCGGTCT GGCCCCCACC ATGGACTGGC TGATCGCGGG CCGGGTCGTG
CAAGGGCTCG GCGGCGGCGG TCTGATGATC ATGTCCCAGG CCATCATCGC CGACATCGTC
CCGGCCCGGC AGCGCGGCAG GTATGCGGGG TTCATCGGAG CGGTATTCGC GGTCTCCTCG
GTTGCCGGTC CGCTCCTCGG CGGCTGGTTC ACCGAAGGGA TCGGCTGGCG TTGGGCGTTC
TGGATCAACA TTCCCCTCGG CCTGCTCGCC TTGGCCGCCG CAGCTTTTCT CCTGCGCCTG
CCCCGGCCGC GTCCGGAACG GCTGCACGTG GATGCGTGGG GCATGGCGTT CCTGGCCGCT
GCCACCACCT GCCTGATCCT GACCAGCACG TGGGGCGGCA GTCAGTACAC CTGGAACTCC
CCGGTGATCA TCGGCCTCAT CCTCGGCACC GTGGTCTCCT CCGCCCTGTT CATCCTGGCC
GAGCACCGCG CCGCTGAACC CATCATCCCG CTCCACCTGT TCCGCGACCG CACCTTTGTC
CTCACCACGG TTGCCGGGCT GCTCACCGGC CTCATGATGT TCGGCATCCT CGGCTACGTC
CCGACCTATG TGCAGATGGC CACCGGGACC GAGGCCACCG TGGCGGGCCT GCTCATGACC
CCCATGATGG GCGGCCTGCT GGTCACCTCG ATCGGCACAG GACAGTTCGT CAGCCGCACC
GGGCGCTACA AGTGGATCCC CGTGGGCGGG TCCTTGATCG TCACCGCAGG GCTCCTGCTC
CTGTCGACCG TCACCCCCAC CACGCCGATC TGGGCCATCT GCGGCTACCT TGTCGTCGTC
GGCATCGGAC TGGGGTCGAG CATGCAACTG CTCGTCCTGA TGGTGCAGAA CGCGTTCCCG
CTCTCCCAGG TGGGGACGGC GACCGCCGCC AACAACTTCT TCCGCCAGAT CGGGGCGTCC
CTGGGCTCGG CGATCGTGGG CAGCCTCTTC ACCGTGCGCC TCATGGACTT CCTGACGGAA
CGCCTTCCCG GGGGAGCCGC ACTCCCCTCC GGGGGCACCA CGTCGTCCCT CACCCCCGAG
CTGGTGCACA GACTGCCCGA TTCTCTCCGC CAGGTCGTCA TCGACTCGTA CAATGACGCT
CTCATCCCCT TGTTCCTGGT GCTCTCCCCG CTGGGTCTCG TCGCGGCCGC CCTGTTGACC
CTGGTCAAAG AGAAACCACT GGCCACGACC ATCGAACGCG ACTAG
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| Protein sequence | MTVPARSDSS ETSPAPITRR SVVLIFLALM LAMLLASLNQ TVLSTALPTM VGELNGVDQM
LWVMTAFILA STIMMPIYGK LGDLIGRKGL FLAAISLFIA GSVIGGLAPT MDWLIAGRVV
QGLGGGGLMI MSQAIIADIV PARQRGRYAG FIGAVFAVSS VAGPLLGGWF TEGIGWRWAF
WINIPLGLLA LAAAAFLLRL PRPRPERLHV DAWGMAFLAA ATTCLILTST WGGSQYTWNS
PVIIGLILGT VVSSALFILA EHRAAEPIIP LHLFRDRTFV LTTVAGLLTG LMMFGILGYV
PTYVQMATGT EATVAGLLMT PMMGGLLVTS IGTGQFVSRT GRYKWIPVGG SLIVTAGLLL
LSTVTPTTPI WAICGYLVVV GIGLGSSMQL LVLMVQNAFP LSQVGTATAA NNFFRQIGAS
LGSAIVGSLF TVRLMDFLTE RLPGGAALPS GGTTSSLTPE LVHRLPDSLR QVVIDSYNDA
LIPLFLVLSP LGLVAAALLT LVKEKPLATT IERD
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