| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4890 |
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| Symbol | |
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| ID | 6277342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1013303 |
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| End bp | 1014844 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642615976 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001888624 |
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| Protein GI | 187919593 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0326454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.212856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAAT CGACCACGAC ACGCCCCGCC GAACTGACGC AGCCGCACGC GCAGACAACC
GCGCCCGCCC ACGCAGCCGA TCACCCGCCG ATCCGCCTGC TGTTTCCGGC GCTGCTGCTG
GTCATGCTGC TCGCCGCGCT CGATCAGACC ATCGTTTCGA CCGCGCTGCC CACTATCGTC
GGGGAACTGG GCGGCCTCAA TAATCTGTCA TGGGTGGTGA CGGCCTACCT GCTCAGCTCG
ACCATCGTCG TGCCGCTGTA CGGCAAATTC GGCGATCTGT TCGGCCGCAA GATCGTCCTG
CAGACGGCGA TCATCGTGTT CCTGGTCGGC TCCGCGTTGT GCGGCGTCGC GCAGGACATG
ACGCAGCTCA TCGTGCTGCG CGCGCTGCAA GGACTCGGCG GCGGCGGCTT GCTGGTGGTG
ACGATGGCCG CCATCGCCGA TGTGATTCCG CCCGCTGAGC GCGGCCGCTA TCAGGGCGTG
TTCGGCGGCG TGTTCGGTCT CGCAACCGTG ATCGGCCCGC TGCTCGGCGG TTTCCTCGTC
GAGCATCTCT CATGGCGCTG GATCTTCTAC ATCAACCTGC CGCTCGGCAT TATCTCGCTC
GTCGTGATCG GTACGGTCTT CAAGCCGCAC GTTCGCCAGG TGAAGCACAC TATCGACTAC
ATGGGCGCCG CGTTCCTCGC CGGCGCCCTC ACCTGCATCA TCCTGTTCAC GAGCCAGGGT
GGCACGATCC TGCCGTGGTC GTCGCCGCAA CTCTGGTTCA CGCTGGGCAT GGGGCTCGTG
TCGATCTGGG GTTTCATCCA CGAAGAACGC AGCGCGGTCG AACCGATCAT GCCGCTCGAA
CTCTTCAAAC AGCGCACGTT TTTGCTGAGC AGTTTGATCG GCTTCATCAT CGGCGTATCG
CTGTTCGGCT CGGTGACGTT CCTGCCGTTG TATTTGCAGG TGGTCAAAGG CTCGACGCCA
TCGGAAGCCG GCATGCAGAT GCTGCCGATG ATGGGCGGTC TGTTCCTGAT GTCGATGGTG
ACGGGCCGGG TGATCAGCAA GATCGGCAAG TACCGCATGT TCCCTATCGC GGGCACGTTT
CTCGTGGCGG TGGCGATGCT GCTGCTCGCA CGCCTGCAGA TCGGCACGCC GATTCATGTG
ATGTATATCG ACATGGGCAT TCTCGGCTGC GGCCTCGGCA TGGTGATGCA GGTGCTGATT
CTCGCGGTGC AGAACACCGT CGAGTTCAAG CACATGGGCG TGGCCACTTC GGGCGCGACA
CTGTTCCGCT CGATCGGCGG ATCGATCGGC GTGGCCAGCT TCGGCGCCGT GTTTTCCAAC
GGCCTCGCTG CGCGCCTCGA AAAGCTGATC CCGCCCGACA CCGAGTTGCC GCACGCGCTC
GGCCCCGCCG CGATCCACGC ATTGCCGCAA GCGTTGCGCG ACGATTATCT GCAAGCATTC
GCGGGTGCGT TGCACACGGT GTATCTTTCG GCCGCCTGCG TGGTGGTGCT CGCCTTCGCG
CTCGCATGGC TGCTGAAGGA TCATCCGCTG CGCAAACATT GA
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| Protein sequence | MDQSTTTRPA ELTQPHAQTT APAHAADHPP IRLLFPALLL VMLLAALDQT IVSTALPTIV
GELGGLNNLS WVVTAYLLSS TIVVPLYGKF GDLFGRKIVL QTAIIVFLVG SALCGVAQDM
TQLIVLRALQ GLGGGGLLVV TMAAIADVIP PAERGRYQGV FGGVFGLATV IGPLLGGFLV
EHLSWRWIFY INLPLGIISL VVIGTVFKPH VRQVKHTIDY MGAAFLAGAL TCIILFTSQG
GTILPWSSPQ LWFTLGMGLV SIWGFIHEER SAVEPIMPLE LFKQRTFLLS SLIGFIIGVS
LFGSVTFLPL YLQVVKGSTP SEAGMQMLPM MGGLFLMSMV TGRVISKIGK YRMFPIAGTF
LVAVAMLLLA RLQIGTPIHV MYIDMGILGC GLGMVMQVLI LAVQNTVEFK HMGVATSGAT
LFRSIGGSIG VASFGAVFSN GLAARLEKLI PPDTELPHAL GPAAIHALPQ ALRDDYLQAF
AGALHTVYLS AACVVVLAFA LAWLLKDHPL RKH
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