Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_11905 |
Symbol | |
ID | 5222582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 2134095 |
End bp | 2136158 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640606662 |
Product | integral membrane protein |
Protein accession | YP_001287842 |
Protein GI | 148823088 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 337 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 204 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGGCC CCACAGCACC GACCACTGCC CCCACCGCAA TCCGAGCCGG TGGCCCGCTG CTCAGTCCGG TGCGACGCAA CATTATTTTC ACCGCACTTG TGTTCGGGGT GCTGGTCGCT GCGACCGGCC AAACCATCGT TGTGCCCGCA TTGCCGACGA TCGTCGCCGA GCTGGGCAGC ACCGTTGACC AGTCGTGGGC GGTCACCAGC TATCTGCTGG GGGGAACTGT CGTGGTTGTG GTGGCTGGCA AGCTCGGTGA TCTGCTCGGC CGCAACAGGG TGCTGCTAGG CTCCGTCGTG GTCTTCGTCG TTGGCTCTGT GCTGTGCGGG TTATCGCAGA CGATGACCAT GCTGGCGATC TCTCGCGCAC TGCAGGGCGT CGGTGCCGGT GCGATTTCCG TCACCGCCTA CGCGCTGGCC GCTGAGGTGG TCCCACTGCG GGACCGTGGC CGCTACCAGG GCGTCTTAGG TGCGGTGTTC GGTGTCAACA CGGTCACCGG TCCGCTGCTG GGGGGCTGGC TCACCGACTA TCTGAGCTGG CGGTGGGCGT TTTGGATCAA CGTGCCGGTT TCGATCGCGG TGCTGACAGT GGCGGCAACC GCCGTCCCTG CGTTGGCCCG ACCGCCCAAA CCGGTCATCG ACTACCTTGG GATCCTGGTC ATCGCTGTGG CCACGACCGC TTTGATCATG GCCACAAGTT GGGGCGGAAC CACCTACGCC TGGGGCTCAG CGACCATTGT CGGGCTGTTG ATCGGGGCCG CAGTGGCGCT GGGTTTCTTC GTGTGGCTGG AGGGCCGCGC CGCTGCGGCC ATCCTGCCGC CCAGGCTGTT TGGCAGCCCA GTATTTGCCG TGTGCTGCGT CCTGTCCTTC GTGGTCGGAT TCGCGATGCT GGGTGCACTG ACCTTCGTAC CGATCTATCT GGGGTACGTG GACGGCGCGT CGGCGACCGC GTCAGGTCTG CGCACGTTGC CGATGGTGAT CGGCCTGCTG ATCGCCTCGA CCGGGACGGG TGTCCTGGTC GGCCGGACGG GCCGCTACAA GATCTTCCCG GTCGCGGGGA TGGCGCTGAT GGCGGTTGCG TTCCTGCTGA TGTCGCAGAT GGACGAGTGG ACGCCACCGC TGCTGCAATC GCTGTACCTG GTCGTCCTAG GTGCCGGCAT CGGATTGTCC ATGCAGGTGC TCGTTCTCAT CGTGCAGAAC ACGTCGTCTT TCGAAGACCT CGGCGTCGCA ACATCGGGTG TGACCTTCTT CCGGGTGGTC GGCGCCTCGT TTGGTACCGC AACATTCGGT GCGTTGTTCG TAAACTTCCT GGACCGAAGA CTCGGTTCCG CGCTGACGTC GGGCGCCGTG CCTGTCCCGG CAGTGCCATC TCCGGCTGTC TTGCATCAGC TGCCCCAGAG CATGGCCGCC CCGATCGTGC GGGCATATGC CGAGTCGCTC ACCCAGGTGT TCCTTTGCGC GGTCTCGGTC ACGGTGGTCG GTTTCATCCT GGCGCTGTTG CTGCGAGAGG TACCGCTCAC CGACATCCAC GATGACGCCG ACGACCTCGG CGACGGGTTC GGTGTGCCCA GAGCCGAATC GCCGGAGGAT GTGTTGGAAA TCGCGGTTCG GCGTATGCTG CCGAACGGGG TGCGACTGCG CGATATTGCG ACACAACCCG GTTGCGGACT CGGCGTCGCC GAGCTGTGGG CCCTTCTGCG GATCTATCAA TACCAGCGGC TGTTCGAGGC AGTACGGCTG ACCGATATCG GTAGACACCT GCACGTGCCC TATCAGGTCT TTGAACCCGT CTTCGACCGT CTGGTCCAGA CCGGCTACGC GGCACGCGAC GGCGACATCT TGACGCTAAC CCCGTCCGGG CACCGTCAGG TCGACTCCCT CGCAGTTTTG ATCCGTCAGT GGCTGCTCGA CCACTTGGCC GTGGCGCCCG GCTTGAAGCG ACAGCCAGAC CACCAATTCG AAGCCGCTCT GCAGCACGTC ACCGACGCGG TGCTCGTTCA ACGAGACTGG TATGAAGATC TGGGCGACCT GTCGGAATCA CGCCAACTCG CGGCTACAAC GTAG
|
Protein sequence | MAGPTAPTTA PTAIRAGGPL LSPVRRNIIF TALVFGVLVA ATGQTIVVPA LPTIVAELGS TVDQSWAVTS YLLGGTVVVV VAGKLGDLLG RNRVLLGSVV VFVVGSVLCG LSQTMTMLAI SRALQGVGAG AISVTAYALA AEVVPLRDRG RYQGVLGAVF GVNTVTGPLL GGWLTDYLSW RWAFWINVPV SIAVLTVAAT AVPALARPPK PVIDYLGILV IAVATTALIM ATSWGGTTYA WGSATIVGLL IGAAVALGFF VWLEGRAAAA ILPPRLFGSP VFAVCCVLSF VVGFAMLGAL TFVPIYLGYV DGASATASGL RTLPMVIGLL IASTGTGVLV GRTGRYKIFP VAGMALMAVA FLLMSQMDEW TPPLLQSLYL VVLGAGIGLS MQVLVLIVQN TSSFEDLGVA TSGVTFFRVV GASFGTATFG ALFVNFLDRR LGSALTSGAV PVPAVPSPAV LHQLPQSMAA PIVRAYAESL TQVFLCAVSV TVVGFILALL LREVPLTDIH DDADDLGDGF GVPRAESPED VLEIAVRRML PNGVRLRDIA TQPGCGLGVA ELWALLRIYQ YQRLFEAVRL TDIGRHLHVP YQVFEPVFDR LVQTGYAARD GDILTLTPSG HRQVDSLAVL IRQWLLDHLA VAPGLKRQPD HQFEAALQHV TDAVLVQRDW YEDLGDLSES RQLAATT
|
| |