| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2480 |
|---|
| Symbol | |
|---|
| ID | 5603008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 2720436 |
|---|
| End bp | 2721950 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640938019 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001478709 |
|---|
| Protein GI | 157370720 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATTG ATAACGTAGC TGGCAACGAA GAAAGCGGCA GGGAGTCTGA ACAGGCACCC
TCGATCCGCT TGCTGTTCTC CGCGCTGCTG CTGGTTATGC TGCTGGCAGC ACTCGATCAG
ACCATTGTGT CTACCGCATT ACCGACCATC GTTGGCGAAT TTGGTGGCCT GGAGAACCTG
TCGTGGGTGG TGACCGCCTA TCTGTTGGCA TCCACCATCG TGGTGCCGCT GTATGGCAAG
TTTGGCGATC TGTTCGGTCG CAAGATAGTG CTGCAGATCG CCATTGTGGT GTTCCTGCTC
GGTTCGGTGC TGTGTGGGTT GGCACAGAAT ATGACGGAAC TTATCCTGAT GCGTGCGCTG
CAAGGGCTGG GCGGCGGGGG TCTGTTGGTG GTGACCATGG CGGTGGTCGG CGATGTGATC
CCACCGGCCG ATCGTGGACG CTATCAAGGG TTGTTTGGCG GGGTATTTGG TCTGGCGACG
GTGGTCGGCC CGCTGATCGG CGGGTTGCTG GTGCAGCATT TCTCCTGGCG CTGGATTTTC
TATATCAACC TGCCGCTGGG GATTTTCGCG CTATTGGTGA TTGGCGCGGT GTTCCAGTCG
AAGGTCAATC GGGTTAAACA TGAGATTGAT TTTCTCGGGG CCAGTTATCT CGCGGCGGCA
CTGACCTGCA TCATCCTGTT TACCAGCCAG GGCGGTACGG TGATGGCCTG GTCGGACGGT
CAACTGTGGT GCATTCTGGC CTTTGGCCTG GTGTCGATAG GCGGGTTTAT CTACGAAGAG
CGGCTGGCGA GCGAGCCGAT TATTCCGCTC GACCTGTTCC GTAATCGCAC CTTTGTACTC
TGTGCATTGA TAGGTTTTAT CGTCGGTATG TCACTGTTTG GATCGGTGAC TTTTCTGCCG
CTGTATCTGC AGGTAGTGAA GGATTCCACG CCTACCCAGG CCGGGATGCA GCTGCTGCCG
CTGATGGGTG GGATTATGCT CAGTTCGATC ATCAGCGGTC GGTTGATCAG CAAGCGCGGC
AAATACCGCA TTTTCCCGAT TATCGGCACC CTGTGTGCCT TGGCAGGCAT GGTGTTGCTG
GGAACGTTGA AAAACTCGAC CCCGGTGCAT TTGCTGTACC TCTACATCAG CCTGCTGGGG
TTGGGGCTGG GTATGGTGAT GCAGGTGATG ATCCTGGCGG CGCAAAACAG CGTAGAGCCA
AAGCATATGG GGGTAGCGAC CTCCAGCGCC ACGCTGTTCC GCTCTATTGG CGGCTCTATC
GGCGTGGCGG TGTTTGGCGC AATTTTCACC AATGTGCTGC ACAGCCGCCT GGCCACTTTG
CTGCCGGAGG GCGCAGAGCT GCCGCGTTCA CTGGGGGCTG ATGCCGTGCA CCATTTGCCG
GTGCAACTGC AAAATGACTA CCTGCAGGCC TTCGGCGGTG CGATCCACTC GGTGTACCAG
ATTGCGGCGG GAGTAATGGC GCTGGCCTTT GCCTTGACCT GGCTGTTGAA AGACGTGCCT
CTGCGCAAGA AATAA
|
|---|
| Protein sequence | MGIDNVAGNE ESGRESEQAP SIRLLFSALL LVMLLAALDQ TIVSTALPTI VGEFGGLENL
SWVVTAYLLA STIVVPLYGK FGDLFGRKIV LQIAIVVFLL GSVLCGLAQN MTELILMRAL
QGLGGGGLLV VTMAVVGDVI PPADRGRYQG LFGGVFGLAT VVGPLIGGLL VQHFSWRWIF
YINLPLGIFA LLVIGAVFQS KVNRVKHEID FLGASYLAAA LTCIILFTSQ GGTVMAWSDG
QLWCILAFGL VSIGGFIYEE RLASEPIIPL DLFRNRTFVL CALIGFIVGM SLFGSVTFLP
LYLQVVKDST PTQAGMQLLP LMGGIMLSSI ISGRLISKRG KYRIFPIIGT LCALAGMVLL
GTLKNSTPVH LLYLYISLLG LGLGMVMQVM ILAAQNSVEP KHMGVATSSA TLFRSIGGSI
GVAVFGAIFT NVLHSRLATL LPEGAELPRS LGADAVHHLP VQLQNDYLQA FGGAIHSVYQ
IAAGVMALAF ALTWLLKDVP LRKK
|
|---|
| |