| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0717 |
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| Symbol | |
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| ID | 3903507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 822803 |
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| End bp | 824479 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637878050 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_479830 |
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| Protein GI | 86739430 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.770491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG CTCGATCAGC GGAGTCCGCC GAGCCCGTCG ACTCCGTGGA CTCCGTGGAC
TCCGCCAGAA CCGGCGCCGG CACGTCTCCG GCGCCCCGCG GCGGCGCCGT GATCCCCTCG
CCGGTCTCCG ACCAGCGCCG GCTCTGGCTG ATCATGGGAG CGCTGCTCCT CGGAATCCTG
CTGGCCTCGC TGGATCAGAC GATCGTGTCG ACGGCACTGC CGACGATCGT CGGGGATCTC
GGCGGCGCCA CCCATCTCTC CTGGGTGGTG ACTGCCTACC TGCTGGCCTC CACGGTGTCC
ACACCGGTCT GGGGCAAGCT CGGTGATCTG TACGGCCGCA AGATCCTGTT CCAGGTGGCG
ATCGTCATCT TCCTGGTGGG CTCGATGATC GCCGGTGCCA GTACGTCGAT GGGGCAGCTG
ATCGCCTTCC GTGCCATCCA AGGGCTCGGC GGCGGCGGGT TGATCATCAG TGCGATGACG
ATCATCAGTG ATCTCGTTCC GCCGCGCGAT CGAGGCCGTT ACCAGGGGCT GTTCGGCGCG
ACGTTCGGTG TGTCGTCGGT GGTCGGTCCG CTGCTCGGCG GCCTGTTCGT CGACCATCTC
TCCTGGCGCT GGGTCTTCTA CGTGAACCTG CCGGTGGGCG CGGTCGCCCT GGTGGTGACG
GCGTTGGCGC TCCCGGCGAC GAGGAACCGC ATCAGGCACG TCATCGACTA CCTCGGCACC
GTGCTCCTGG CCATGGCAAC GACCAGCCTC GTGTTGCTGA CCAGCCTGGG CGGCACCACC
TACGCCTGGG GATCACCGGA GATCATCGGG ATGGGCGTCG CGGGAGTCGT GCTCCTCGTC
GGGTTCGTGT TCGTCGAACG AGTGGCGGTC GAACCCGTGC TGCCGCTGAC GCTGTTCCGG
GTCCGGGTGT TCTCGGTGGC CGGCGCGGTC GGCTTCGTCG TCGGCTTCGC GATGTTCGGC
GCGATCGTCT TCCTGCCGCT GTTCCTCCAG GTGGTGAAGG GAGTCGACCC GACGGACTCC
GGCCTGCAGA TGCTGCCGGT GATGGGTGGG CTGCTGCTCA GCTCGATCAT CTCCGGCCGG
CTCATCAGCC GGTGGGGCCG TTACAAGATC TTCCCGGTCG TCGGTACCGC GATGATGTCG
ATCGGCCTGT TCCTGCTGTC GTTCATCAGT CCCGACATCT CCACGCTGCA GCTCACGTTG
TCCATGTTCG TCCTCGGGGT CGGGATCGGC GCGGTCCTGC AGGTCCTGGT CATGGCCGTG
CAGAATGCCG TCGACTACCG GCAGATGGGC GTGGCCACCT CGGGTGCGAC CTTCTTCCGG
TCCATCGGCG GGTCGTTCGG TACCGCCGTG TTCGGCGCGA TCTTCGCGAA CCAGCTCAGG
GGTAACCTCG CCGAGCGGTT TGCGGGCATC CCGTTGCCAT CCGGTCTGTC CGCCTCCGGT
TCCAACCTCA GCCCCCAGGT GCTCCACAGG CTGCCCCCGA CGATCCGGGA CGGATTCGTC
CAGGCGTTCT CGGACGCGAT GCAGACCGTC TTCCTGGTGG CGGTGCCGAT CGGTCTGTGC
GCCTTCGCGC TGGCCTGGTT GCTGCCCGAG ATCCGCCTGG GAAACACCGT CGGTGGCGCG
CGGCCCGCGG CGCCGGGCTC GGCGAAGGCG GATGAGACCG CGGAGGTCCT CAAGTAG
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| Protein sequence | MTQARSAESA EPVDSVDSVD SARTGAGTSP APRGGAVIPS PVSDQRRLWL IMGALLLGIL
LASLDQTIVS TALPTIVGDL GGATHLSWVV TAYLLASTVS TPVWGKLGDL YGRKILFQVA
IVIFLVGSMI AGASTSMGQL IAFRAIQGLG GGGLIISAMT IISDLVPPRD RGRYQGLFGA
TFGVSSVVGP LLGGLFVDHL SWRWVFYVNL PVGAVALVVT ALALPATRNR IRHVIDYLGT
VLLAMATTSL VLLTSLGGTT YAWGSPEIIG MGVAGVVLLV GFVFVERVAV EPVLPLTLFR
VRVFSVAGAV GFVVGFAMFG AIVFLPLFLQ VVKGVDPTDS GLQMLPVMGG LLLSSIISGR
LISRWGRYKI FPVVGTAMMS IGLFLLSFIS PDISTLQLTL SMFVLGVGIG AVLQVLVMAV
QNAVDYRQMG VATSGATFFR SIGGSFGTAV FGAIFANQLR GNLAERFAGI PLPSGLSASG
SNLSPQVLHR LPPTIRDGFV QAFSDAMQTV FLVAVPIGLC AFALAWLLPE IRLGNTVGGA
RPAAPGSAKA DETAEVLK
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