| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0241 |
|---|
| Symbol | |
|---|
| ID | 5897515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 267094 |
|---|
| End bp | 268665 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641560725 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001681876 |
|---|
| Protein GI | 167644213 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.232516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC AGACCTTCAC CGACACCGAG CGCCGGCTGA CGCTGGGCGC CCTGATGATC
GTCTTTCTGC TCAGCGCCCT GGACCAGACG GTGGTCTCCA CGGCCATGCC GCGGATCATC
GCCGAGCTCA ACGGCCTGAC GCTCTATGCC TGGGTCACCA CCGCCTACCT GCTGACCTCA
ACGGTGATGG TGCCGATCTG GGGCAAGCTG GGCGACATCT ATGGCAGGAA GCCCGTCCTG
CTGGCCGGCA TCGGCATCTT CCTGGCCGGC TCATGGCTGG CGGGCCTGTC GGGCGAGTTC
GGCGACCTGC TGGGCATGAG CGGCATGGTC CAGCTGATCG TCTTCCGCGC CTTGCAGGGC
ATCGGCGGCG GGGCGCTATT CACCACCGCC TTCGCGATCA TCGCCGACCT TTATCCGCCG
CGGGAGCGGG GCAAGTTCGC CGGCATCTTC GGTTCGGTGT TCGGCCTGGC CAGCGTGCTG
GGTCCGCTGA TCGGCGGCTA TTTCACCGAC CACGGGACGG TGCAGCTGGG CTCGCACCTG
ATCGCCGGCT GGCGCTGGGT GTTCTATGTC AACCTGCCGC TCAGCCTGCT GTCGCTGTTC
ATGATCCTGG TCAAGATGCC GCCGCTCGAG CACCGGCGCT CCGGCGCGGT CGACTACGTC
GGCGCCATCC TGCTGGTCGC CGCCTTCGTG CCGCTGCTGC TGGCGCTCAG CCTGGGCGGT
CACGACTTCG CCTGGAGCTC GCCCCAGAGC CTGGGCCTGC TCGCCTTCGC CGCCGTCGCG
CTGATCCTCT TCCTCTACGC CCAGACCAAG GCCAGCAATC CACTGGTGCC GCTGCGGCTG
TTCGGCAACC GGGTGTTCGC CACCGCCAAC CTGGCCGGCT TCCTGATCTC CATGGCCTTC
CTCGGCGTGG TGACCTTCCT GCCGCTCTAC ATGCAGCTGG GCCTGGGCGT CGACGCCACG
ACCAGCGGCC TGGCCATCCT GCCGCTGATG GGCGGGCTGA TCGTCGCCTC GACCGCCGCC
GGCCAGATGG TCAGCAAGAC CGGGCGCTAC AAGCCGCTGA TGATCGTTGG CGCCGTGTTG
CTGATGACCG GGGTCTGGCT GCTCAGCCGG GTGACCGTCC ACACCACCCT GCCCGACCTG
TGCTGGCGGA TGGCCATCGT CGGCCTGGGC CTGGGACCGG GCCAGAGCCT GTTCAACATC
GCCACCCAGA ACGCCGTCGA GGTGCGCGAC ATCGGCGTGG CCACCAGTTC CAACCAGTTC
TTCCGCCAGA TCGGCTCGAC GATCGGCGTG GCGGTGTTCG GCGCCCTGCT GACCCATCGC
CTGGCCAACG AGGGCCAGGG CCTGGACCTG GGCGCCCTGC AGGGTCTGGC CCTGAAGGCC
ACCGCGACCG GCGCCGCCCG TCACGCCGAC CCGGCCCTGG CCCAGGCCCT GACCCACGCG
ATCACCGGCG TGTTCTTCGC GGGCCTGTTC GTGATCGGCC TAGGCTTGGT GGTGATCTTC
CTGATCCCAG AGCTGCCGCT GCGCGGCCGG CAACCAGGGC CGGAGCCGGT GCTGGAGAAG
GAGCCGGTTT AG
|
|---|
| Protein sequence | MTTQTFTDTE RRLTLGALMI VFLLSALDQT VVSTAMPRII AELNGLTLYA WVTTAYLLTS
TVMVPIWGKL GDIYGRKPVL LAGIGIFLAG SWLAGLSGEF GDLLGMSGMV QLIVFRALQG
IGGGALFTTA FAIIADLYPP RERGKFAGIF GSVFGLASVL GPLIGGYFTD HGTVQLGSHL
IAGWRWVFYV NLPLSLLSLF MILVKMPPLE HRRSGAVDYV GAILLVAAFV PLLLALSLGG
HDFAWSSPQS LGLLAFAAVA LILFLYAQTK ASNPLVPLRL FGNRVFATAN LAGFLISMAF
LGVVTFLPLY MQLGLGVDAT TSGLAILPLM GGLIVASTAA GQMVSKTGRY KPLMIVGAVL
LMTGVWLLSR VTVHTTLPDL CWRMAIVGLG LGPGQSLFNI ATQNAVEVRD IGVATSSNQF
FRQIGSTIGV AVFGALLTHR LANEGQGLDL GALQGLALKA TATGAARHAD PALAQALTHA
ITGVFFAGLF VIGLGLVVIF LIPELPLRGR QPGPEPVLEK EPV
|
|---|
| |